MAKE YOUR GENOMIC DATA LOOK STUNNING WITH THE UCSC GENOME BROWSER - The Secrets Of Custom Tracks!

In this video, we show you how to visualise your own data on the UCSC genome browser using “custom tracks”. We use the example of ChIP-seq files for big datasets. We explain file formats and show you the steps of how to upload your data via your own free web server space. We also show you how to create your own colourful genomic annotations so that you can generate attractive and professional scale presentations.
This tutorial on the UCSC Genome Browser is brought to you by Dr Adam West in the College of Medical Veterinary and Life Sciences at the University of Glasgow, Scotland. Look out for our other videos in this tutorial series that will help you get the most out of the UCSC Genome Browser.
We hope you found this video useful. Please support us by liking the video and consider subscribing for more informative content. Leave us a comment if you thought this video was helpful or if there is further information you would like to share with us and the community. Thank you.
www.gla.ac.uk/people/adamwest
/ genomicsgurus
/ genomicsgurus
UCSC Genome Browser Users Guide to custom tracks:
genome-euro.ucsc.edu/goldenPat...
File hosting locations:
genome-euro.ucsc.edu/goldenPat...
CyVerse Discovery Environment
cyverse.org/discovery-environ...
Track line format for big data files:
track type=bigWig name="My Big Wig" description="A Graph of Data from My Lab" color=255,255,255 visibility=2 bigDataUrl=myorg.edu/mylab/myBigWig.bw

[@hwbtafrsca]

Fantastic tutorial! Thanks for sharing.

[@GenomicsGurus]

Glad you found it useful Stephen!

[@2017573]

Excellent tutorial.

[@GenomicsGurus]

Thanks Troy. Glad you found it useful

[@gepolianochaves2754]

Thank you! I'll use this tutorial in the creation of my Epigenetics figure.

[@GenomicsGurus]

Glad you found it useful!

[@priyankabiotech87]

Please also explain how to upload and analyse HiC data files

[@LT-dl7jw]

How can someone overlay these tracks?

[@GenomicsGurus]

You need to create multiwig tracks
genome.ucsc.edu/goldenPath/help/trackDb/trackDbHub.html#aggregate