Just a minor note. From the perspective of the offspring; when recombination occurs during meiosis in one of the parents, it are the grandparents chromosomes that recombine.
Hi, I work in livestock genomics, so this is why my videos tend to feature livestock genotypes in examples. But to be honest, the main purpose behind the videos is to give general overview about the methods and approaches, and for that any data is good. At the end, everythin is "just" a compbination of four letters - G, C, A, T (and of course U as a bonus)
Professor when I am using your commands for human data, I face errors 😀… which I can understand is because of different species… but it’s requested to just keep touching human data too… Your prompting Genomics free of cost which is a good effort and we all really appreciate it.. please keep it up 👍
@@mirzaatifadnan Thanks for the comment an suggestion! I will try to do more human related analyses/example sets in the future. As a short term solution, you can just remove all PLINK options related to chromosome sets (--chr-set, --cow and similar), as the human chromosome set is take by default by the program
Thanks for the suggestion! his one is coming as well in he series, so everything is in one place. If you are interested in LD specifically, I have a playlist on this already, also with theory, here: ua-cam.com/play/PLdf-U83sN48Mz11I5WzLRXRFuWwitVii3.html
@@sankar_riser The new one on LD will come, so you may check. The very simple explanation, even way-way simpler as in the current videos is not a bad idea!! I will think about it how to do it, perhaps also otherwise than with words.
thank you sir
very helpful
Just a minor note. From the perspective of the offspring; when recombination occurs during meiosis in one of the parents, it are the grandparents chromosomes that recombine.
Thanks for this series. I learn a lot from it!
Thanks for the note. You are correct.
Thank you so much for this whole series! super helpful!
Indeed helpful! Thanks for your efforts!
Great series! Very helpful!
Thank you for the video!
Why your not focusing on Human samples ??
Hi, I work in livestock genomics, so this is why my videos tend to feature livestock genotypes in examples.
But to be honest, the main purpose behind the videos is to give general overview about the methods and approaches, and for that any data is good. At the end, everythin is "just" a compbination of four letters - G, C, A, T (and of course U as a bonus)
Professor when I am using your commands for human data, I face errors 😀… which I can understand is because of different species… but it’s requested to just keep touching human data too…
Your prompting Genomics free of cost which is a good effort and we all really appreciate it.. please keep it up 👍
@@mirzaatifadnan Thanks for the comment an suggestion! I will try to do more human related analyses/example sets in the future.
As a short term solution, you can just remove all PLINK options related to chromosome sets (--chr-set, --cow and similar), as the human chromosome set is take by default by the program
Please don't! I will study plants. For me, the more general the lectures, the better!
Nice lecture professor. Please make a video of linkage mechanism , LINKAGE disquilibrium..
Thanks for the suggestion! his one is coming as well in he series, so everything is in one place.
If you are interested in LD specifically, I have a playlist on this already, also with theory, here: ua-cam.com/play/PLdf-U83sN48Mz11I5WzLRXRFuWwitVii3.html
@@GenomicsBootCamp sir I already completed the playlist. But need of very simple explanation level to school children
@@sankar_riser The new one on LD will come, so you may check. The very simple explanation, even way-way simpler as in the current videos is not a bad idea!! I will think about it how to do it, perhaps also otherwise than with words.
@@GenomicsBootCamp sure sir....