Making a Phylogenetic Tree with BUSCO Genes: Video #1

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  • Опубліковано 3 січ 2025

КОМЕНТАРІ • 9

  • @usamadon2981
    @usamadon2981 2 роки тому +1

    Hey. Hope you are doing good.
    It would be really helpful if you can upload a video regarding the installation of BUSCO and also assessing genome quality of a sequence.

    • @shawnmcmurtrey8090
      @shawnmcmurtrey8090  2 роки тому

      Here you go!! ua-cam.com/video/3mKhUPscFKw/v-deo.html Thank you for the suggestion Usama! Please like and subscribe if you found this helpful =)

    • @usamadon2981
      @usamadon2981 2 роки тому +1

      @@shawnmcmurtrey8090 yes thank you 😊. Liked and subscribed. :)
      If you can get on to the second part of my comment about accessing genome quality of sequence of any organism. That would also be very helpful. Thanks in advance

    • @Sadiawaqas-kn1pg
      @Sadiawaqas-kn1pg 2 роки тому +1

      @@shawnmcmurtrey8090 thank you so much. this is great

    • @shawnmcmurtrey8090
      @shawnmcmurtrey8090  2 роки тому

      @@usamadon2981 Thank you for subscribing! QUAST is a useful tool that I have used in the past. ua-cam.com/video/t53D9AVj0I4/v-deo.html I will try to upload some more videos within the next day or two related to this subject.

    • @usamadon2981
      @usamadon2981 2 роки тому +1

      Also add a video on phylogenetic analysis using R.. ggtree

  • @benjyluis
    @benjyluis Рік тому +1

    Hi, thanks for the video! I am working with 332 genomes. So after I run BUSCO, I got 332 "full_table.tsv" files. I was wondering if there is a script to rename at once each "full_table.tsv" file into a specific "SAMPLEID_full_table.tsv". Thanks in advance