wow for some reason I tried doing this myself a bunch of times and after an hour I figured lets try youtube. This video was clear concise and worked perfectly! Thank you for your attention to detail!
I first tried to directly install R studio with sudo commend, which is successful installed however cannot open it, thanks to this video that I realized that I need to install the R package for my system first then could install R studio.
Great! Be sure to bookmark this video, too: ua-cam.com/video/3Rflq0cZ_1o/v-deo.htmlsi=gXNz5S8Qvo_Vbo3G . Sooner or later you will encounter problems installing R packages on Linux. This video will show you how to fix it. There are some exceptions, where it is also required to install programs on Linux separate from R, but this tutorial will fix many problems you'll encounter.
Thank you, I've successfully installed rstudio with your tutorial. You said that you have population genetics software installed on your virtual machine. Do you know any open source alternatives to AlleleA1 software?
Hi, I hadn't heard of that software before but it looks pretty cool! We're you using this website? faculty.washington.edu/herronjc/a1/#:~:text=AlleleA1%20simulates%20evolution%20at%20a,migration%2C%20mutation%2C%20and%20inbreeding.
@@DrJBanta Yes, I am. But the web version of the program lacks some features. The desktop version is NOT available for Linux operating systems. The software is used to predict genotypic frequencies and allelic frequencies in populations in Hardy-Weinberg equilibrium state.
@@DB-po2lh I just downloaded the Windows version and I was able to run it on Ubuntu Linux. The secret is to run it with the companion software WINE. Be sure you have WINE installed on your Ubuntu machine first. Then put the file allelea1.exe on the Ubuntu desktop. Then open the terminal and go to the Desktop ("cd Desktop"). Then type wine allelea1.exe and you should be good to go! Best of luck, Josh
After I paste the file name into terminal I get this message. This package is uninstallable Dependency is not satisfiable: libssl1.0.0|libssl1.0.2|libssl1.1
Thanks for the video. Just one additional question, should I install the R and RStudio directly in my system, or installing in a conda env may be a better option? Could some one help me?
Hmm, that's an interesting question. I have seen programs and their dependencies "break" other programs under Ubuntu, so it may not be a bad idea to sandbox it. That said, I don't know how well R or Rstudio runs under Conda. It looks like it's messy: community.rstudio.com/t/using-rstudio-within-a-conda-environment/128780/4
I get this error everytime I try to install the R package (base) ezra@HP-Pavilion-Gaming-Laptop:~$ sudo apt -y install r-base gdebi-core [sudo] password for ezra: Reading package lists... Done Building dependency tree... Done Reading state information... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: r-base-core : Depends: libicu70 (>= 70.1-1~) but it is not installable Depends: libtiff5 (>= 4.0.3) but it is not installable Recommends: r-base-dev but it is not going to be installed E: Unable to correct problems, you have held broken packages.
wow for some reason I tried doing this myself a bunch of times and after an hour I figured lets try youtube. This video was clear concise and worked perfectly! Thank you for your attention to detail!
Thanks, I spent two days trying to figure out how to install this in a Google Chromebook, and your video made it so easy to go.
Thanks a lot Josh. Very clearly explained. I was asked to install gdebi-core
, Thanks again.
I first tried to directly install R studio with sudo commend, which is successful installed however cannot open it, thanks to this video that I realized that I need to install the R package for my system first then could install R studio.
Gracias señor Josh, por ti mi vida ya no está tan dlv porque ahora puedo llorar haciendo mi tarrea de análisis.
Excellent! Clear, concise and accurate instructions!!
Simple and Working!!!
Great work. Thank You..
very nice video, and for taking your time to give instructions for each OS
Very useful! Thank you!
It works. Thanks a lot !!
Thanks so much. It was really usefull!
Thankyou sir the video is really useful
Thank you! first time using linux, found an old 2011 macbook pro 17in replaced OS w/Ubuntu and thought why not use it for coding.
Great! Be sure to bookmark this video, too: ua-cam.com/video/3Rflq0cZ_1o/v-deo.htmlsi=gXNz5S8Qvo_Vbo3G . Sooner or later you will encounter problems installing R packages on Linux. This video will show you how to fix it. There are some exceptions, where it is also required to install programs on Linux separate from R, but this tutorial will fix many problems you'll encounter.
Thanks a lot! This tutorial really helped me.
I have a problème to install : my computer indicates me "gdebi error, file not found" whereas it is in my downloads. Do you know why ?
ah same did you got the answer?
Very useful Thanks a lot
ótimo vídeo!!!
Parabéns! 😁😁
Great explanations
Thank you so much Sir
Hi is this on Wayland? Does Rstudio support Wayland yet?
Thank you, I've successfully installed rstudio with your tutorial. You said that you have population genetics software installed on your virtual machine. Do you know any open source alternatives to AlleleA1 software?
Hi, I hadn't heard of that software before but it looks pretty cool! We're you using this website? faculty.washington.edu/herronjc/a1/#:~:text=AlleleA1%20simulates%20evolution%20at%20a,migration%2C%20mutation%2C%20and%20inbreeding.
@@DrJBanta Yes, I am. But the web version of the program lacks some features. The desktop version is NOT available for Linux operating systems. The software is used to predict genotypic frequencies and allelic frequencies in populations in Hardy-Weinberg equilibrium state.
@@DB-po2lh I just downloaded the Windows version and I was able to run it on Ubuntu Linux. The secret is to run it with the companion software WINE. Be sure you have WINE installed on your Ubuntu machine first. Then put the file allelea1.exe on the Ubuntu desktop. Then open the terminal and go to the Desktop ("cd Desktop"). Then type wine allelea1.exe and you should be good to go! Best of luck, Josh
Thank you so much Sir. Nice video.
After I paste the file name into terminal I get this message.
This package is uninstallable
Dependency is not satisfiable: libssl1.0.0|libssl1.0.2|libssl1.1
same for me ..
Thanks you saved the day
Thanks for the video. Just one additional question, should I install the R and RStudio directly in my system, or installing in a conda env may be a better option? Could some one help me?
Hmm, that's an interesting question. I have seen programs and their dependencies "break" other programs under Ubuntu, so it may not be a bad idea to sandbox it. That said, I don't know how well R or Rstudio runs under Conda. It looks like it's messy: community.rstudio.com/t/using-rstudio-within-a-conda-environment/128780/4
But see: astrobiomike.github.io/R/managing-r-and-rstudio-with-conda
great stuff, thanks
Its taking forever to download it? it took that much time for you too?
Thank you so much!!
Thank you so much
Thank You sir
ERROR Unable to locate package gbedi-core
I had that error recently. Did you run the command 'sudo apt update' first?
Thanks!😀
I get this error everytime I try to install the R package
(base) ezra@HP-Pavilion-Gaming-Laptop:~$ sudo apt -y install r-base gdebi-core
[sudo] password for ezra:
Reading package lists... Done
Building dependency tree... Done
Reading state information... Done
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:
The following packages have unmet dependencies:
r-base-core : Depends: libicu70 (>= 70.1-1~) but it is not installable
Depends: libtiff5 (>= 4.0.3) but it is not installable
Recommends: r-base-dev but it is not going to be installed
E: Unable to correct problems, you have held broken packages.
Thanks GOOOOOOOOOD
thanks
Thank you so much Sir
Thanks