Proteomics Focused Bioinformatics Workshop 2021 - MaxQuant output and Limma results

Stephanie Byrum, Director of the Bioinformatics team at the IDeA National Resource for Quantitative Proteomics explains MaxQuant output (ProteinGroups.txt) and how to interact with the Limma tables provided as part of the basic service at the National Resource.
idearesourceproteomics.org/
#ideaproteomics

[@noorfatima-gj8cb]

Hi, from where we take the data which we use as a input?

[@ideanationalresourceforqua4640]

The input is from MaxQuant. Have you used MaxQuant before?