Thank you so much for this tutorial. I have some questions, how do I select the best dock model? Which ligand RMSD value is better? Because I got ligand RMSD values higher than 150. The platform mentions this: The ligand RMSDs are calculated by comparing the ligands in the docking models with the input or modeled structures. Therefore, the ligand RMSD is not necessarily a metric of the accuracy for the corresponding model.
Hello sir Very informative video . I had a doubt how to choose RNA seq from NCBI like if I want to select 16srRNA of E.coli. If possible make a video on docking of rRNA and protein docking Thankyou
sir g aik bat nh smj aie mjy, ye sary youtube p already prepared ligands ka e interaction ho rhaa, why not synthesised ligands, new strcuture. ab agr koi ghalti sa new ligand bna e la to uska interaction kasy kerwaya. kindly jaldi bta dijya ga
Thank you Doc. for this wonderful tutorial.
Though I don't understand the language, I was able to follow the video/slides perfectly.
More power to Dr Naveed. Please start lectures on Multi locus sequence typing and different tools involved like DnaSP, eburst and PubMLST
sure dear in queue
Very helpful video! Can you show how can we show 2D interaction for the same?
Thank you so much for this tutorial. I have some questions, how do I select the best dock model? Which ligand RMSD value is better? Because I got ligand RMSD values higher than 150. The platform mentions this: The ligand RMSDs are calculated by comparing the ligands in the docking models with the input or modeled structures. Therefore, the ligand RMSD is not necessarily a metric of the accuracy for the corresponding model.
Sir please make a video related to DNA ligand binding
Anxiously waiting for this
hope its work for you
Kindly sir make a video on molecular simulation on discovery studio
thanku so much sir.
Glads its helps you
Hello Sir,
Can you please create a lecture video on miRNA and mRNA docking.
Thank sir.
Hello sir
Very informative video . I had a doubt how to choose RNA seq from NCBI like if I want to select 16srRNA of E.coli.
If possible make a video on docking of rRNA and protein docking
Thankyou
Sir, If I want to do protein-ligand docking, haddock server can be used for this purpose? Are the process will be same ?
hello sir please let know after obtatining the strcuture in Hdock how can i download the docked structure .
sir g aik bat nh smj aie mjy, ye sary youtube p already prepared ligands ka e interaction ho rhaa, why not synthesised ligands, new strcuture. ab agr koi ghalti sa new ligand bna e la to uska interaction kasy kerwaya. kindly jaldi bta dijya ga
Sir what if ligand SMILE are tooo big >200 then how to see that on sweestargetpredictio
Sir how to model uuuuuuu RNA?