PyMOL: Superimpose (& Amazing NMR Structures!)

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  • Опубліковано 7 лип 2024
  • How to superimpose proteins to examine structural changes, and a look at how we can explore protein dynamics with NMR solution structures.

КОМЕНТАРІ • 25

  • @mitchy000
    @mitchy000 4 роки тому +3

    Your pymol tutorials are fantastic! Very helpful, keep em coming! Thank you!

  • @abdullahugurlu2622
    @abdullahugurlu2622 Рік тому

    you cannot know how much I appreciate this, thanks a lot

  • @antonsurviyanto5896
    @antonsurviyanto5896 4 роки тому +2

    This is the best tutorial ever..Thank you...

  • @esmanuryaz9269
    @esmanuryaz9269 3 роки тому

    It's really helpful tutorial I've ever seen about pyMOL. Thank you so much.

  • @bigshot98
    @bigshot98 4 роки тому

    Thanks for your excellent tutorial! It's very helpful!

  • @eaudejenny4215
    @eaudejenny4215 3 роки тому

    You are so great at teaching us this. Thank you soo much. Your video is really helpful ☺️☺️☺️

  • @Nnnnnn-ge2on
    @Nnnnnn-ge2on 3 роки тому

    Thanks for great tutorial

  • @Scuderia11052011
    @Scuderia11052011 Рік тому

    IT'S SO HIGHLY USEFUL!!! THANKS so much!!!!!!!

  • @jiaxingwang3976
    @jiaxingwang3976 4 роки тому

    Thank you! This helped me a lot!

  • @hanstsahnang4533
    @hanstsahnang4533 2 роки тому

    Woww awesome tutorial. Thanks alot

  • @iremergenlioglu3982
    @iremergenlioglu3982 4 роки тому

    Thanks for tutorials! If you know could you show how to align two different size ligands in the same ligand site?

  • @juan_felix
    @juan_felix Рік тому

    Awesome

  • @davidvargas5148
    @davidvargas5148 4 роки тому

    Great tutorial! Do you know how to dock intermediates or transition states into a protein active site?

  • @castilloh.gianmarco1048
    @castilloh.gianmarco1048 2 роки тому

    thanks classe

  • @imrocknreeling
    @imrocknreeling 3 роки тому +1

    How can we define same 3D Orientation (axis) in different PDB structures. For publications?

  • @kainaquinterochavez3454
    @kainaquinterochavez3454 2 роки тому

    Hi, I have a question in superimposing 2 proteins dimers, pymol doesnt exactly align them how I want to. Any chance I can get some insight on how to do this? hoping you can reply. thanks

  • @aronshoara4499
    @aronshoara4499 Рік тому

    Why does the window tab (top left corner) says python?

  • @hanaamohamed5090
    @hanaamohamed5090 4 роки тому

    i have problem in set up pymol in my computer
    Do you know any other visualizer?

  • @P__EmtiajulHoque
    @P__EmtiajulHoque 3 роки тому

    How can i install this app in my mac? Is it Paid Software?

  • @beedr594
    @beedr594 3 роки тому

    Pourin' up some blue juice, pull up in a blue coupe
    Same color blues, foreign bands match the new shoes
    Sicko Gang, D9, match the fee, high
    New skullheads so you know that we shine
    Sicko Gang, DG, drain you like the Rugrats
    Drain like a nosebleed
    Foreign car with two seats

  • @AlphaNumeric123
    @AlphaNumeric123 Рік тому

    These are extremely great videos. I recall on this channel you said you can get rid of the amide bonds and just show the side chian--is that correct? It's been so long I can't quite remember what video I heard it on (or if I heard it somewhere else altogether)

  • @davidvargas5148
    @davidvargas5148 4 роки тому

    Great tutorial! Do you know how to dock intermediates or transition states into a protein active site?

    • @MolecularMemory
      @MolecularMemory  4 роки тому

      I get this question a bit, so perhaps I should learn more about it! I haven't done any docking with PyMOL, only a tiny bit of experience docking with another program. Thanks for watching!

    • @brandonveltri2825
      @brandonveltri2825 4 роки тому

      When I first downloaded PyMOL, a pop up box with the different plugins appeared...after selecting the autodock one in addition to the default ones, there was no ‘ok’ or ‘done’ option...for some reason after I lost most of the plugins. Do you know how to keep those? This was a fascinating tutorial by the way