Genome wide study Part 18 | miRNA | How to find the microRNA target sites | putative microRNA
Вставка
- Опубліковано 14 жов 2024
- In this video, we will use the
plantgrn.noble....
online tool to find the miRNA microRNA target sites from the gene sequence. Use the psRNATarget: A Plant Small RNA Target Analysis Server to find the target sites. We can also try to know that how to download mature miRNA from PmiREN or Plant microRNA encyclopedia
www.pmiren.com/...
![[UA] NAVI vs MOUZ | BO5 | IEM Rio 2024](http://i.ytimg.com/vi/CMBYk0cbGoA/mqdefault.jpg)
Very nicely explained sir. Thanks
Thank you for nice information. Bless you lot
Amazing skills 🔥❤️#STARGAMBIT🔥
hello. could you please guide me about the same procedure for human? any website link that is as friendly as pmirna. thanks in advance
SIR IN PLACE OF CDS SEQUENCE IF WE PASTE WHOLE MRNA GENOME AND MIRNA TARGET THE REGION OTHER THAN CDS ....THEN IF THERE IS TRANSLATION BLOCK OR CLEAVAGE DONE?
You can try. I think it will give the cleavage.
@@genomewidestudy sir is there any problem with cleavage?
Very informative Dr. Sab..
Thank you so much for this. Very helpful. 💜💜
Glad it was helpful!
How to find target miRNA for species which are not available in psRNA database e.g., Gossypium raimondii?
What is the importance of Expect value? Should I consider all of the miRNAs or should I consider only the ones with expect value of 5?
Very informative you summed up information very nicely.
Superb 💯💯💯
Thanks
Hello, i am working on Juglans regia, but all the online
softwares you are using there is Juglans regia? So suggest me some
software in which I can find GFF file and all other things for Juglans regia. Thank You
U can find it from phytozome
@@talks9092 i didnt find Juglans regia on phytozome
Thanks for your comment. you can find your required files from below link. If still feel any difficulty, then let me know, I will try to solve it.
www.ncbi.nlm.nih.gov/genome/?term=17683
@@genomewidestudy Thank You for your Help
Hi, is there a reason why miRNAs are not included in current articles?
will included in the next article. Thanks
will included in the next article. Thanks
Hi! i am unable to access PsRNATarget site, due to the Discontinuation of Website Service.
Is there any solution? or an alternative tool??
You can try Proxy VPN. Because in some region, this database is not working. So it will work through VPN. Hope your problem will solve. Thanks
I Need the gff files of Piper nigrum. I am unable to retrieve it. Please help
hello, I want to read your articles, can you tell me your name?
Muhammad Zulfiqar Ahmad
Wow great video..
hi. i HAVE A PLANT GENE. i WANT TO SEARCH FOR THE MICRO RNA TARGETING THIS GENE. CAN YOU PLZ HELP ME IN THIS REGARD?
I think I have explained in this video
Good work
how to get target CDS sequences?
Follow this video
Genome wide study Part 8 | Downloading Genomic CDS Promoter sequences and GFF file from Plant genome
How to generate figure of miRNA target sites.
You can show the sites by arrow in the sequence...
or if you have any pic, share, I will tell you that how it was drawn...