Hi,I love your video series & I am really looking forward to your course. I saw in a reply to another comment that the course is potentially on hold for now. Having just started my PhD, I was provided with some raw RNAseq reads that I now know are of good quality (thanks to your videos!!)I need to set up a pipeline, and I know some basic programming (python, I'm learning R as well right now). Can you refer me to some resources that I can use to start building my own pipeline? Thanks a lot & good luck with your research. If you have the time, I'd love to exchange emails or something!! :)Josh
Joshua Gillard hey, great to hear your sequences are of good quality. I've been thinking on what to focus on in the course, as my initial plan seemed to unspecific when I thought about it. But I want to know make it a relatively short course that shows how a basic pipeline can be written and automated. It'll come soon I hope. As for your question, check bioconductor for some R packages that suit your needs. There are plenty, especially for rnaseq!
Hi, it is very informative for the beginners like me in the field of NGS data analysis.
Hi,I love your video series & I am really looking forward to your course. I saw in a reply to another comment that the course is potentially on hold for now. Having just started my PhD, I was provided with some raw RNAseq reads that I now know are of good quality (thanks to your videos!!)I need to set up a pipeline, and I know some basic programming (python, I'm learning R as well right now). Can you refer me to some resources that I can use to start building my own pipeline? Thanks a lot & good luck with your research. If you have the time, I'd love to exchange emails or something!! :)Josh
Joshua Gillard hey, great to hear your sequences are of good quality. I've been thinking on what to focus on in the course, as my initial plan seemed to unspecific when I thought about it. But I want to know make it a relatively short course that shows how a basic pipeline can be written and automated. It'll come soon I hope.
As for your question, check bioconductor for some R packages that suit your needs. There are plenty, especially for rnaseq!
@@nextgenerationsequencinghq6402 you WebSite isnt working. did you change its adress?
Hi, your website is not working.
same. I would really like to find a tutorial on building these pipelines for my research