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Velsera
Приєднався 29 чер 2019
CGC Webinar: Accelerating Pediatric Cancer Research: Harnessing the Power of the OpenPedCan Project
In this webinar, Dr. Jo Lynne Rokita delves into the innovative work behind the Open Pediatric Brain Tumor Atlas (OpenPBTA) and its expansion into the Open Pediatric Cancer (OpenPedCan) project. These initiatives offer a harmonized, open-source multi-omic dataset from approximately 6,000 pediatric cancer patients, encompassing over 100 histologies and 7,000 tumor events. Dr. Jo Lynne Rokita gives the history of the development of these projects, which include over 50 ready-to-use, reproducible analysis modules and more than 100 somatic outputs, designed to accelerate discovery, validation, and clinical translation in pediatric cancer research. Additionally, Dr. Rokita presents in-preparation results from this work, demonstrating evidence that CLK1 is a candidate oncogenic dependency in pediatric cancer. View the preprint here: www.biorxiv.org/content/10.1101/2024.08.03.606419v1
00:00:00 Start
00:00:12 Introduction
00:02:06 OpenPedCan
00:25:57 New Results: CLK1
00:40:21 Discussion and QA
00:49:51 OpenPedCan Demo on the Cancer Genomics Cloud
---
Learn more:
OpenPBTA paper: www.cell.com/cell-genomics/fulltext/S2666-979X(23)00115-5
OpenPedCan repo: github.com/d3b-center/OpenPedCan-analysis
OpenPedCan preprint: www.biorxiv.org/content/10.1101/2024.07.09.599086v1
00:00:00 Start
00:00:12 Introduction
00:02:06 OpenPedCan
00:25:57 New Results: CLK1
00:40:21 Discussion and QA
00:49:51 OpenPedCan Demo on the Cancer Genomics Cloud
---
Learn more:
OpenPBTA paper: www.cell.com/cell-genomics/fulltext/S2666-979X(23)00115-5
OpenPedCan repo: github.com/d3b-center/OpenPedCan-analysis
OpenPedCan preprint: www.biorxiv.org/content/10.1101/2024.07.09.599086v1
Переглядів: 85
Відео
Dogs and Cancer (Part 2): Emerging Methods and Technologies in Comparative Oncology
Переглядів 742 місяці тому
Dogs experience spontaneously arising cancer at roughly five times the rate that humans do, and their immune systems and environmental exposures are very similar to those of humans. Recent work in both “wet” and “dry” labs have produced valuable new methods for sample collection and diagnosis; breed prediction and classification; and tumor microenvironment and genetic analysis. These advances p...
Dogs and Cancer (Part 1): Canine cancer genomic resources and research
Переглядів 1063 місяці тому
Dr. Cheryl London speaks on "Advances in the canine cancer genomics toolbox", followed by Gina Kuffel with a demonstration of the Integrated Canine Data Commons (ICDC) single click export button, "From building cohorts to conducting meaningful analysis." Then, Dr. Elaine Ostrander presents her lab’s recent research in "The Genetic analysis of invasive bladder cancer risk in Shetland sheepdogs."...
April Webinar: Pancreatic Cancer and Master Regulator Analysis
Переглядів 404 місяці тому
Our April Webinar is presented by Dr. Basil Bakir, the recipient of the 2023 Fellowship in Cancer Informatics and Data Science Research from the Pancreatic Cancer Action Network (PANCAN). Dr. Bakir presents his ongoing research to discover the master regulator genes that may determine which treatments patients will best respond to. From the abstract: Pancreatic cancer is a challenging disease w...
Increasing Data Access and Interoperability of the Sequence Read Archive (SRA) through GA4GH DRS API
Переглядів 1205 місяців тому
In our March Webinar, Drs. Jared Rozowsky and Cera Fisher walk you through a new workflow available on the Cancer Genomics Cloud, the SRA to DRS Converter (cgc.sbgenomics.com/public/apps/admin/sbg-public-data/sra-to-drs-converter). The NCBI Sequence Read Archive (SRA) houses an estiamted 33 petabytes of genomic/transcriptomic sequencing data, including both human and non-human data. Our new wor...
Hereditary Cancer Testing with Velsera
Переглядів 915 місяців тому
In this video, learn about Velsera's solutions for hereditary cancer and explore a case study with Solaris Health. Hereditary cancer testing offers your patients a unique opportunity to explore their pre-disposed risk of cancer. Offering this type of test poses unique challenges, but can be rewarding for patient health and your lab's financial success. Velsera can help you navigate this journey...
2024 NGS State of the Union
Переглядів 926 місяців тому
In the live session, you will learn about how the new 2024 CPT codes may impact your organization's reimbursement rates, current trends for NGS reimbursement, the Medicare Gapfill process and more! We will also cover how Velsera can support your organization to maximize reimbursement and streamline your revenue cycle management workflow. We look forward to seeing you!
Insights into the mechanisms and structure of breakage-fusion-bridge cycles in cervical cancer
Переглядів 1216 місяців тому
Our February webinar features work done by Isabel Rodriguez and Ayse Keskus from the Laboratory of Translational Genomics at the National Cancer Institute. Ms. Rodriguez and Dr. Keskus will present on methods and results from their recently published paper in the American Journal of Human Genetics (doi: 10.1016/j.ajhg.2024.01.002). This paper characterized 19 cervical and four head and neck can...
Cancer Genomics Cloud January 2024 Webinar
Переглядів 696 місяців тому
Presented by Dr Rowan Beck and Dr Zelia Worman, this presentation dives into the dynamic world of the Cancer Genomics Cloud (CGC) as we unveil a treasure trove of advancements and innovations from the past year and give you an exclusive sneak peek into the exciting features lined up for 2024. What’s on the docket? - New Data Studio Session Environments: Unlock the power of data! - The OHIF Imag...
2 9 Data Studio - Python
Переглядів 347 місяців тому
The Cancer Genomics Cloud (cgc.sbgenomics.com) is an ecosystem part of the Cancer Research Data Commons (datascience.cancer.gov/data-c...) that facilitates collaboration and scalability for cancer research, with the ultimate goal is to advance precision medicine outcomes. The ecosystem is cloud based with the theme of bringing the analysis to the data to empower researchers, clinicians and data...
2.10 Data Studio - SAS
Переглядів 207 місяців тому
The Cancer Genomics Cloud (cgc.sbgenomics.com) is an ecosystem part of the Cancer Research Data Commons (datascience.cancer.gov/data-c...) that facilitates collaboration and scalability for cancer research, with the ultimate goal is to advance precision medicine outcomes. The ecosystem is cloud based with the theme of bringing the analysis to the data to empower researchers, clinicians and data...
2.8 Data Studio - R
Переглядів 167 місяців тому
The Cancer Genomics Cloud (cgc.sbgenomics.com) is an ecosystem part of the Cancer Research Data Commons (datascience.cancer.gov/data-c...) that facilitates collaboration and scalability for cancer research, with the ultimate goal is to advance precision medicine outcomes. The ecosystem is cloud based with the theme of bringing the analysis to the data to empower researchers, clinicians and data...
2.7 R Shiny
Переглядів 277 місяців тому
The Cancer Genomics Cloud (cgc.sbgenomics.com) is an ecosystem part of the Cancer Research Data Commons (datascience.cancer.gov/data-c...) that facilitates collaboration and scalability for cancer research, with the ultimate goal is to advance precision medicine outcomes. The ecosystem is cloud based with the theme of bringing the analysis to the data to empower researchers, clinicians and data...
2 6 Publishing a Tool or Workflow
Переглядів 439 місяців тому
The Cancer Genomics Cloud (cgc.sbgenomics.com) is an ecosystem part of the Cancer Research Data Commons (datascience.cancer.gov/data-c...) that facilitates collaboration and scalability for cancer research, with the ultimate goal is to advance precision medicine outcomes. The ecosystem is cloud based with the theme of bringing the analysis to the data to empower researchers, clinicians and data...
End-to-end microscopy imaging with MCMICRO and MCMICRO for HTAN
Переглядів 19110 місяців тому
Our October 2023 webinar, presented by Cera Fisher and Boris Majić, features the MCMICRO software tool on the Cancer Genomics Cloud, originally developed by collaborators in the Human Tumor Atlas Network (HTAN) consortium. MCMICRO is designed for detailed analysis of cellular structures through highly multiplexed tissue imaging - that is, whole-slide tissue imaging of samples with multiple chan...
Orthanc and Dicom Images on the Seven Bridges Cancer Genomics Cloud
Переглядів 9010 місяців тому
Orthanc and Dicom Images on the Seven Bridges Cancer Genomics Cloud
Galaxy on the Seven Bridges Cancer Genomics Cloud
Переглядів 5910 місяців тому
Galaxy on the Seven Bridges Cancer Genomics Cloud
Analysis Walkthrough - Variant Calling
Переглядів 3610 місяців тому
Analysis Walkthrough - Variant Calling
BioData Catalyst-SB Platform: Find Tools in the Public Apps Gallery
Переглядів 1810 місяців тому
BioData Catalyst-SB Platform: Find Tools in the Public Apps Gallery
BioData Catalyst-SB Platform: File Management with Folders and Metadata
Переглядів 1710 місяців тому
BioData Catalyst-SB Platform: File Management with Folders and Metadata
Introduction to the Seven Bridges Cancer Genomics Cloud
Переглядів 27310 місяців тому
Introduction to the Seven Bridges Cancer Genomics Cloud
BioData Catalyst-SB Platform: Bring Your Own Data
Переглядів 3910 місяців тому
BioData Catalyst-SB Platform: Bring Your Own Data
BDC-SB Platform: How to Create Projects and Add Collaborators
Переглядів 4010 місяців тому
BDC-SB Platform: How to Create Projects and Add Collaborators
Finding Hosted Study Files with the Data Browser on BDC-SB
Переглядів 3511 місяців тому
Finding Hosted Study Files with the Data Browser on BDC-SB
Hosted Datasets in the BioData Catalyst Ecosystem
Переглядів 2611 місяців тому
Hosted Datasets in the BioData Catalyst Ecosystem
Getting Started on the BDC-SB Platform
Переглядів 5811 місяців тому
Getting Started on the BDC-SB Platform
Introduction to BioData Catalyst Powered by Seven Bridges
Переглядів 7411 місяців тому
Introduction to BioData Catalyst Powered by Seven Bridges
Multi-modal research on the CGC: deep learning on a pan-cancer PDX histology image repository
Переглядів 10411 місяців тому
Multi-modal research on the CGC: deep learning on a pan-cancer PDX histology image repository
amazing thank you ladies for what you do
Her hairs so gorgeous
I only see the first two videos on the series. Are the rest coming?
promo sm
Boo!