A step-by-step guide to ChIP-seq data analysis

[@ManchesterBCF]

A very clear and informative tutorial. Just to add that the latest version of the peak caller (MACS2) specifically handles paired-end mapped reads. This results in a more accurate estimation of the mean DNA fragment size that can lead to a better estimation of the peak summit.

[@ziqifu2232]

Extremely helpful and detailed introduction to sequencing! Thank you.

[@peipeiguo3169]

thank you for this great presentation!
Very clear, practical and informative.

[@thirupugal]

Very informative, thank you

[@susanhsiao7867]

Thank you. It is exactly what I need.

[@elviskim9806]

amazing tutorial

[@MAISARAHABSAMAD]

Thank you so much for this tutorial

[@cathytang2558]

Thanks, explain the overall workflow very well. Just wondering if anyone has any recommendations about a tutorial that explains everything in terms of the command-line/ programming environment so that we can plot whatever we want.

[@TheRookieAnalyst]

You can try making use of the Biostar Handbook_2nd edition by Dr. Istvan Albert. It contains practical guide into the command line/programing environment using different OS as case study. All the best.

[@sunnyyoda5511]

THANK YOU, Thank You, Thank you, thank you

[@patriziopanelli7259]

Hello, How do you normalized the Chip-seq samples? thanks

[@ShahzadNSyed]

thank you!

[@jamescameron159]

Can anyone link me to the fastq files used here?