192 - Working with 3D and multi-dimensional images in python

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  • Опубліковано 5 лис 2024

КОМЕНТАРІ • 27

  • @sergiomorellmonzo1780
    @sergiomorellmonzo1780 3 роки тому +1

    Great work!!! This approach is scalable to remote sensing applications since we usually work with a stack of images captured at different wavelengths. I've been looking to implement a GLCM-3D feature extraction method for a long time, but I can't find code examples. I make this suggestion as an idea for a video. Regards.

  • @khushpatelmd
    @khushpatelmd 3 роки тому +2

    Thank you so much. 3D UNET next please

  • @mofatuzi
    @mofatuzi 3 роки тому +2

    Thank you very much! Could you make a video about super-resolution TEM imaging by deep learning, just like NVIDIA DLSS technology? Sometimes, we do not have good imaging sensor, only poor pixie number, such as 512*512. Can you use deep learning to improve it to 2k or even 4k image? That will be very useful! Thanks!

  • @sriti_hikari
    @sriti_hikari 2 місяці тому

    thank you for the basic video as you claimed! Is there a a way to calculate the directions in 3d of fibers in an image? I have fibers that can go in any direction, x, y or z!

  • @cocoarecords
    @cocoarecords 3 роки тому

    love your channel man

  • @radhikamalhotra7221
    @radhikamalhotra7221 3 роки тому +1

    Amazing work !!
    Would you please suggest me how should I load/work on the dataset having 200 set of patients and every patient has a set of 4 MRI-modalities + with ground truth (these modalities to be used as channels) and all the images are in 3D and I want to build a 2D model for multi-class segmentation.
    Hoping to hear from you soon!!!

  • @anisaggoun2888
    @anisaggoun2888 3 роки тому

    Great work. Thank you, truly.

    • @billyshepard3786
      @billyshepard3786 3 роки тому

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    • @andershayes8498
      @andershayes8498 3 роки тому

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  • @biswanathsaha2208
    @biswanathsaha2208 3 роки тому

    Awesome Video! Sir can you make a video how can I measure and plot Point spread functions on these somewhat spherical blobs/cells

  • @venkatesanr9455
    @venkatesanr9455 3 роки тому

    Hi Sir,
    Thanks for your valuable content as usual. What is the difference of tiff and tif formats (I believe both are same). Also, I like you to do 3d CNN based analysis like image segmentation in future.
    Thanks

  • @kulkarniajinkya
    @kulkarniajinkya 2 роки тому

    He Sreeni, great video. How do you extract the volume of say each of the 3D 'cylinders' in the image?

  • @patilvinod555
    @patilvinod555 3 роки тому +2

    please conduct tutorial on MRI images (nii and hdr)

    • @denizozkan7605
      @denizozkan7605 2 роки тому

      hello, were you able to find how to work on nii.gz file format?

  • @nguyenhongthai2970
    @nguyenhongthai2970 3 роки тому

    thank you for nice tutorial, sir

  • @patilvinod555
    @patilvinod555 3 роки тому

    how to appy to nii or hdr format medical image

  • @indasetyawati6855
    @indasetyawati6855 2 роки тому +1

    sir can u give tutorial for 3D images classification CNN?

    • @DigitalSreeni
      @DigitalSreeni  2 роки тому +1

      Do you have a data set that can be used for that task?

    • @indasetyawati8933
      @indasetyawati8933 2 роки тому +1

      Yes i have sir, and there's 1110 data Ct scan and that data for multiclass

  • @johannesschmidt8611
    @johannesschmidt8611 3 роки тому

    Great work!
    You mentioned napari but didn't use it as it comes with a lot of dependencies. I think it would help of lot people that wotk with 3D/4D images to introduce them to napari!

  • @naveedarif3565
    @naveedarif3565 9 місяців тому

    can we save the 3D image in JPG, PEG format?
    if there's specific formats for 3D image so please mention them....

    • @DigitalSreeni
      @DigitalSreeni  9 місяців тому

      JPG cannot handle 3D data.

    • @naveedarif3565
      @naveedarif3565 8 місяців тому

      @@DigitalSreeni sir! what are those formats can store the 3D image just?

  • @garrettkuketz2715
    @garrettkuketz2715 3 роки тому

    What are you using to load script line by line? I have to run my entire code each time and would benefit with what you are using

    • @DigitalSreeni
      @DigitalSreeni  3 роки тому

      Almost every IDE provides you a way to run line by line. Please look at the documentation for your IDE. FYI, I am using Spyder that comes with Anaconda package.

  • @PoojaKumari-ic7zh
    @PoojaKumari-ic7zh 2 роки тому

    Sir....sk_3dimg = io.imread('images/3d_image.tif')...this folder is not available on your github

  • @yoyomcg
    @yoyomcg 3 роки тому +1

    great work nigga, i'm becoming a machine learning expert