Difference between FASTA and FASTQ file formats. How to make a fasta formatted file.

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  • Опубліковано 27 сер 2024

КОМЕНТАРІ • 28

  • @russellguo7572
    @russellguo7572 27 днів тому

    this is amazing! thank you so much!very organized and clear

  • @kuldipjayaswall7924
    @kuldipjayaswall7924 3 роки тому +1

    Videos are very informative sir pl keep updating all of us with these information

  • @pushpalathamanjunatha7810
    @pushpalathamanjunatha7810 2 роки тому +1

    excellent, slowing down the lecture will be highly beneficial

  • @tulikabhardwaj484
    @tulikabhardwaj484 3 роки тому +1

    Thank you so much for such an informative video.

  • @prasanthchigurupatii
    @prasanthchigurupatii 3 роки тому +1

    Hi sir
    Your videos and the way u r representation is awsome superbbb

  • @akanshasingh5213
    @akanshasingh5213 Рік тому +2

    Can you please upload more videos regarding NGS. It’s a very good explanation between these two file formats

  • @vinoann1165
    @vinoann1165 3 роки тому +2

    Expecting more videos under bioinformatics topic sir.

  • @michellew4634
    @michellew4634 2 роки тому

    so helpful thanks for making this!

  • @tiberiusmogendigisemba5395
    @tiberiusmogendigisemba5395 2 роки тому +1

    Thanks 🙏🙏

  • @stephanie_4203
    @stephanie_4203 2 роки тому

    I luv your channnel. Thanks for exists

    • @XploreBio
      @XploreBio  2 роки тому

      I am glad you like them!

  • @muni-88
    @muni-88 5 місяців тому +1

    can i get fastq file on ncbi database or can i convert fasta ti fastq
    i need to run macrel, a antimicrobial peptide prediction pipeline from whole genome for my phd.
    can u plz help

    • @XploreBio
      @XploreBio  14 днів тому

      You can get .fastq file from NCBI's SRA, ENA, or DDBJ. Or if you have got it sequenced you will get it from sequencing facility. Fasta file does not carry quality information therefore you cannot convert it to fastq.

  • @ebenezeroladimeji599
    @ebenezeroladimeji599 3 роки тому

    hello XploreBio. I love your classes. however, I am currently working on a paper that has something to do with RNA-seq data. I would love if you could be of help in anyway.. Thanks.

    • @XploreBio
      @XploreBio  3 роки тому

      Hi. thanks Ebenezer what kind of help do you need.

    • @ebenezeroladimeji599
      @ebenezeroladimeji599 3 роки тому

      @@XploreBio may I have your email for proper information or anyway to communicate outside youtube...

    • @XploreBio
      @XploreBio  3 роки тому

      Write to me @
      xplorebio@yahoo.com

  • @chemobioseditorialakhilesh5403
    @chemobioseditorialakhilesh5403 3 роки тому

    Sir, I am writing research article there is a used of different software like VMir, MFold , Mature Bayes , miRBD , cytoscape , clueGO, CluePedia ,CytoKEGG, Reactome , MCODE etc.. Can help me how we use these software...

    • @XploreBio
      @XploreBio  3 роки тому

      Please write to me @
      xplorebio@yahoo.com

  • @abrhamulu9610
    @abrhamulu9610 3 роки тому

    Dear Sir, Can I submit my sequence data to NCBI in FASTq Format? if no, How can I change my FASTq data to FASTA format?

    • @XploreBio
      @XploreBio  3 роки тому +1

      What kind of data you want to submit? Large data is submitted as fastq. gene or protein sequence as fasta. there are tools for converting fastq to fasta.

    • @XploreBio
      @XploreBio  3 роки тому +1

      This might help. www.biostars.org/p/85929/

    • @abrhamulu9610
      @abrhamulu9610 3 роки тому

      @@XploreBio thank you Sir, I have 16S rRNA sequence data (fastq format) from metagenomic DNA of four environmental samples, each samples containing 600 to 1000 spp. of bacteria.

    • @abrhamulu9610
      @abrhamulu9610 3 роки тому

      @@XploreBio thank you, Sir!

  • @prasanthchigurupatii
    @prasanthchigurupatii 3 роки тому +1

    Sir ,
    Please make us understand about Transcriptomics data representation plots.