AutoDock Tutorial- Part 4. Preparing Ligand for Docking

[@TheBioPedialalitdewalkar]

Thank a lot for a perfect lecture.. Waiting for docking result analysis part autodock.

[@amy1996judith]

Ore pwoli🔥🔥🔥🥳🥳🥳

[@adityashelar749]

Hello sir can plz help onces i done ligand into pdbqt it get break into pieces.

[@monshbrh]

Should the ligand be in a 3D format or 2D. 2D structure looks flat. That shouldn't be the case, right?

[@TheAbzaby]

It depends on your system. If you are doing a protein ligand docking or solvent effects then you need 3D. If you need to study interactions like dipole even 1D is enough. If you are working with clusters or rings like porphyrins then 2D is enough.

[@abrahamshinemathews8635]

Kidu ❤️❤️😘😘

[@alnamathews6321]

Katta support!💪🔥

[@arifasherina6409]

hi sir why i cant do input then select molecule for autodock4? thanks

[@BinhJen]

Can I minimize all ligands in my library in one shot?

[@TheAbzaby]

I dont know about such and option. But you can dock multiple ligands in one shot

[@anandhu_gopan]

Sir any text book for studying autodock ?

[@saptarshibiswas7482]

open babel doesn't work accurate

[@yaseenjanalchemist8026]

Sir wtsp plz