GWAS tutorial with GEMMA
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- Опубліковано 27 сер 2024
- A Genome wide assocation study #GWAS #tutorial using #GEMMA and some open access data ( #deafness in #dogs)
GEMMA download: github.com/gen...
The script used in the video: github.com/Gen...
The dog GWAS paper: doi.org/10.137...
The dog data from the paper: datadryad.org/...
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Nicely explained GWAS using GEMMA
Great please expand this topic and also demonstrate the graph tuning for paper. How we can make attractive graphs for paper. Thanks again
Great suggestion! Thanks!
A video on how to annotate the manhattan plot will be very useful🙏🙏
Noted. Thank you!
Thank You So Much Dear
It's an excellent tutorial. Can you suggest anyway we can only extract specific trait associated SNPs done by GWAS?
Thanks
Could anyone guide me on where can I find GWAS done with rrBLUP in R?
Please, can you explain how to install GEMMA? Thnaks
Hi, You dont need to install. It is just an executable file. So you have it in the directory, if it is not executable use: chmod +x gemma
to make it executable and then run according to the tutorial in the video