GWAS tutorial with GEMMA

A Genome wide assocation study #GWAS #tutorial using #GEMMA and some open access data ( #deafness in #dogs)
GEMMA download: github.com/gen...
The script used in the video: github.com/Gen...
The dog GWAS paper: doi.org/10.137...
The dog data from the paper: datadryad.org/...
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[@arthchaudhari4017]

Nicely explained GWAS using GEMMA

[@World365updates]

Great please expand this topic and also demonstrate the graph tuning for paper. How we can make attractive graphs for paper. Thanks again

[@GenomicsBootCamp]

Great suggestion! Thanks!

[@yawpr3ko837]

A video on how to annotate the manhattan plot will be very useful🙏🙏

[@GenomicsBootCamp]

Noted. Thank you!

[@mervanbayraktar5269]

Thank You So Much Dear

[@uchigava]

It's an excellent tutorial. Can you suggest anyway we can only extract specific trait associated SNPs done by GWAS?

[@serychristianrenaud]

Thanks

[@navinshrestha5842]

Could anyone guide me on where can I find GWAS done with rrBLUP in R?

[@manuferrando6339]

Please, can you explain how to install GEMMA? Thnaks

[@GenomicsBootCamp]

Hi, You dont need to install. It is just an executable file. So you have it in the directory, if it is not executable use: chmod +x gemma
to make it executable and then run according to the tutorial in the video