Ontologies In Agriculture
Ontologies In Agriculture
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FAO&CGIAR collaboration in the context of Agrovoc Thesaurus
PrIn 2021, FAO and CGIAR established a collaboration to improve food and agriculture data exchange through the use and enhancement of the AGROVOC thesaurus, a controlled multilingual vocabulary covering terminology related to FAO's areas of interest. AGROVOC is a valuable tool to classify data homogeneously, facilitate interoperability and reuse. It can facilitate the collection, storage and use of agronomic data, allowing easy and reuse of data by humans and machines. Since 2022 the CGIAR manages a Working Group co-chaired by the International Institute of Tropical Agriculture (IITA) and the Alliance of Bioversity International and CIAT that defines the framework for CGIAR collaboration to enrich AGROVOC. In addition to organising the presentation of CGIAR concepts, AGROVOC provides semantically organised terms from the field of agronomy. This webinar will present the results of the CGIAR working group on AGROVOC and outline the benefits and results of this collaboration to date. The 3 presentations are:
# 1. 00:00 "Results of the collaboration between CGIAR and FAO in the context of the AGROVOC Thesaurus” - Imma Subirats-Coll and Kristin Kolshus, Food and Agriculture Organization of the United Nation”
- Imma Subirats-Coll is a senior information management officer at the Food and Agriculture Organization of the United Nations. She leads the AGROVOC, AGRIS and AGORA programmes with the objective to enhance accessibility and visibility to knowledge, information and data produced by FAO members.
- Kristin Kolshus is an information management officer in the FAO Partnerships and UN Collaboration Division. Her work focuses on information management and access to scientific information. She is an agronomist and is the curator of AGROVOC thesaurus, a multilingual, collaborative thesaurus for agricultural concepts.
# 2. 10:00 “Benefits and results of the Collaboration between FAO-AGROVOC and CGIAR from CGIAR perspective “ - Sara Jani and Data Management Officer, The International Center for Agricultural Research in the Dry Areas - Monitoring, Evaluation and Learning team (ICARDA-MEL)
- Sara Jani is the Knowledge Management Coordinator at The International Center for Agricultural Research in the Dry Areas within the Knowledge Management sub-team of the Monitoring, Evaluation, and Learning team. She is responsible for the quality assurance and management of ICARDA knowledge products, project registration, and coordinating the contribution of the ICARDA & CGIAR curator team to the FAO-managed AGROVOC
- Asma Jeitani is a Data Management Officer at ICARDA within the Data Management sub-team of the Monitoring, Evaluation and Learning team. Her work has mainly included data curation, configuration of projects on MEL, support the annual reporting of CGIAR initiative, and is a member of the CGIAR-AGROVOC curation team.
# 3. 23:24 “Describing CGIAR Digital Outputs with AGROVOC” - Alan Orth, Systems Analyst, Data and Research Methods, International Livestock Research Institute
-Alan Orth has a background in computer science with a specialty in Linux systems administration. He has been working in research support at ILRI in Kenya since 2009. He discusses the use of AGROVOC as one of the standard vocabularies used to describe CGIAR digital outputs in major CGIAR repositories.
Переглядів: 100

Відео

Plant Phenomics Data Management Challenges & Solutions based on MIAPPE @ INRAe, ELIXIR & EMPHASIS
Переглядів 5811 місяців тому
Presented by Cyril Pommier, INRAe URGI, leader of the Data and Federation service at INRAE URGI as well as the ELIXIR European Infrastructure Plant community and the Phenome Emphasis Phenomic French Infrastructure Information System. Plant Phenomics data management and integration has been a challenge for a long time due to their heterogenity and their dispersion. Nonetheless important progress...
Ontology Service Landscape of DataPLANT by Dr. Angela Kranz
Переглядів 74Рік тому
Dr. Angela Kranz is the scientific coordinator at IBG-4 (Bioinformatics, Forschungszentrum Jülich) for the NFDI project DataPLANT. The webinar introduces the DataPLANT consortium, its tools and services and how it is utilizing ontologies to provide sustainable and well-annotated research data management (RDM). The central component of DataPLANT is the Annotated Research Context (ARC), which ena...
GEMS informatics: Driving innovation in the food and agricultural sector. by K. Silverstein
Переглядів 79Рік тому
Kevin Silverstein, Minnesota Supercomputing Institute, USA, provides an overview on the objectives and progress of the GEMS platform (gems.umn.edu/) and discuss the use of ontologies.
Agroportal Ontology Repository: value added of indexing CGIAR ontologies, C. Jonquet, INRAe, 2022
Переглядів 79Рік тому
This webinar provides an overview of Agroportal features and perspectives as a registry of ontologies for agrifood systems, as well as the result of the collaboration with CGIAR.
An introductory journey to the Virtual Knowledge Graph approach to data access and data integration
Переглядів 1,3 тис.2 роки тому
Virtual Knowledge Graphs (VKGs) have recently gained attention due to their flexible data model, which reduces the effort needed for integration across different, possibly heterogeneous, data sources. In this webinar, Alessandro Mosca presents how to access scientific data stored in a (relational) database through the Virtual Knowledge Graph (VKG) approach. In such an approach, the data are exp...
Ontologies CoP Annual Meeting 2021
Переглядів 962 роки тому
In this video, Ontologies CoP members presents the different ontologies and projects led over the last 4 years, date at which the CoP joined the Platform for Big Data in Agriculture. TIMELINE 00:00:00 History of the CoP in brief - Elizabeth Arnaud (Alliance Bioversity International-CIAT) CoP accomplishments over the last 4 years. 00:04:14 Knowledge sharing - Céline Aubert (IFPRI) 00:08:20 Trait...
The Ontologies CoP as told by its members
Переглядів 482 роки тому
The Ontologies Community of Practice brings together a critical mass of expertise to tackle major issues related to semantics for FAIR data in agri-food science. The Ontologies CoP has been created in 2017 and reaches over 500 members in 2021. In this video, some members of the Ontologies CoP are reflecting on what the CoP has brought to their work. TIMELINE 00:00:16 Jacqueline Muliro - Data an...
The CARE Principles of Indigenous Data Governance
Переглядів 9872 роки тому
In this webinar Dr. Stephanie Russo Carroll and Talia Anderson present the CARE Principles for Indigenous Data Governance. The current shift to big data, open science, and open data does not fully engage with Indigenous Peoples rights and interests. Over the past five years, Indigenous data sovereignty has become a movement to increase both Indigenous access to Indigenous data and Indigenous le...
Cocoa ontology - A collaborative pathway for FAIR Data
Переглядів 1822 роки тому
In this webinar Dr Arun Kumar Pratihast and Abidemi Elesho from Wageningen University and Research present the integrated data collection workflow they have developed to make the most of cocoa agronomy datasets. Although cocoa is a global commodity and its production involves millions of smallholder farmers, there is a scarcity of high-quality data on cocoa-forest-livelihood interaction. Due to...
Labelled Property Graphs, OWL and WebProtégé
Переглядів 3,3 тис.3 роки тому
During this webinar, Matthew Horridge from Stanford University presents his team's work on making WebProtégé compatible with a Labelled Property Graph (LPG) representation of OWL ontologies. WebProtégé is one of the most widely used open source collaborative ontology engineering tools for the Web Ontology Language (OWL). Labelled Property Graphs have recently gained a lot of traction in industr...
GOMO - Governance Operational Model for Ontologies
Переглядів 5583 роки тому
During this webinar, Alexander Garcia from BASF presents the Governance Operational Model for Ontologies, or GOMO, his team is developing. GOMO establishes an agile governance model for BASF ontologies. Its ultimate goal is to facilitate the development of interoperable ontologies that make it possible to build an enterprise knowledge graph. GOMO adheres to and builds upon related bodies of sta...
Ontology tools provided by EBI: OLS, ZOOMA, OxO
Переглядів 3913 роки тому
In this webinar, Henirette Harmse, Software Engineer at the European Bioinformatics Institute (EBI) presents OLS, ZOOMA, and OxO- platforms developed by the ontology tools team at EBI. These services are used extensively by bioinformaticians, biocurators, and biological researchers both inside and outside of EBI. OLS enables searches across 260 ontologies representing 6.5 million terms. Given a...
Advances of the Crop Ontology website and graph visualization using graph database
Переглядів 2503 роки тому
In this webinar, Carlos Quiros, co-leader of the digital solution team at the Alliance Bioversity-CIAT, explains the new version of the Crop Ontology website that uses a graph database for ontology management and visualization. He demos how he uses Neo4J to create graph visualization of the ontologies. Crop Ontology website:cropontology.org/ Engage with the Ontologies CoP: - LinkedIn: www.linke...
Training - Searching and requesting new terms in ontologies
Переглядів 1563 роки тому
In this session you will learn how to use the Ontology Lookup Service of EBI to search for a term, and how to request new terms or suggest updates in ontologies with the term submission form used by the Crop Ontology and the GitHub issue tracker used by the Agronomy Ontology. This training is targeting those using controlled vocabularies, thesauri and ontologies for data annotation that want to...
RHoMIS, SEONT and OIMS: how do we progress and digitally connect these elements?
Переглядів 1363 роки тому
RHoMIS, SEONT and OIMS: how do we progress and digitally connect these elements?
What is the Ontologies CoP?
Переглядів 5553 роки тому
What is the Ontologies CoP?
Webinar- SEONT, the Socio-Economic Ontology
Переглядів 1914 роки тому
Webinar- SEONT, the Socio-Economic Ontology
Webinar - Strengthening AGROVOC through engagement with expert communities
Переглядів 1324 роки тому
Webinar - Strengthening AGROVOC through engagement with expert communities
Webinar - FoodOn, LexMapr, PO2
Переглядів 2824 роки тому
Webinar - FoodOn, LexMapr, PO2
Webinar: Use of ontologies and knowledge graph by BASF and KWS
Переглядів 6704 роки тому
Webinar: Use of ontologies and knowledge graph by BASF and KWS
Webinar - Agronomy Ontology and AgroFIMS
Переглядів 2754 роки тому
Webinar - Agronomy Ontology and AgroFIMS
Webinar: Use of ontologies and knowledge graphs by Bayer CropScience
Переглядів 1,4 тис.4 роки тому
Webinar: Use of ontologies and knowledge graphs by Bayer CropScience
Webinar- Crop Ontology, IBP and Breedbase: collaboration for harmonizing breeding data
Переглядів 3484 роки тому
Webinar- Crop Ontology, IBP and Breedbase: collaboration for harmonizing breeding data
Webinar: Knowledge graph
Переглядів 6554 роки тому
Webinar: Knowledge graph
Webinar: Semantic annotation of images in the FAIR data era
Переглядів 1835 років тому
Webinar: Semantic annotation of images in the FAIR data era
Webinar : Machine Learning and ontology
Переглядів 12 тис.5 років тому
Webinar : Machine Learning and ontology
Webinar: What makes an ontology a reference for data annotation?
Переглядів 7705 років тому
Webinar: What makes an ontology a reference for data annotation?
Challenges and opportunities of establishing data-driven agronomic services - D.Jimenez
Переглядів 1435 років тому
Challenges and opportunities of establishing data-driven agronomic services - D.Jimenez
Open data on plant traits: challenges of dissemination and re-use - S. Leonelli
Переглядів 845 років тому
Open data on plant traits: challenges of dissemination and re-use - S. Leonelli

КОМЕНТАРІ

  • @bartkl
    @bartkl Рік тому

    Fantastic presentation. Very useful and inspiring!

  • @bedrajemal9477
    @bedrajemal9477 Рік тому

    DR.PASCAL MY DEAREST BOSS BIG RESPECT

  • @nativebiodataconsortium4524
    @nativebiodataconsortium4524 2 роки тому

    ua-cam.com/video/xOXbtaVSBns/v-deo.html

  • @janacyrus6567
    @janacyrus6567 2 роки тому

    Hi, can OxO be used to integrate cross-references between ontologies into a (graph) database or should it only be used as presented in the speech?

  • @romualdwandji5490
    @romualdwandji5490 2 роки тому

    Please I can I hve this presentation ?

  • @ParitoshLD
    @ParitoshLD 2 роки тому

    wonderful, interested in use of OWL2LPG API. how do you use this? Neo4j provides neosemantics plugin N10S

  • @dalmirdasilvah
    @dalmirdasilvah 2 роки тому

    Hey, great work. Can this presentation be shared?

  •  3 роки тому

    This webinar is really great. I do think that OWL + Protégé + Neo4j is a powerful ontology to LPG stack. Thank You Matthew !

  • @pushpofficial9945
    @pushpofficial9945 4 роки тому

    Nice video 👌👌👌👌👌🌹🌹🌹

  • @OntologiesInAgriculture
    @OntologiesInAgriculture 5 років тому

    Subscribe to our LinkedIn group to be inform about next webinars! www.linkedin.com/groups/13707155/