Nickel and Copper
Nickel and Copper
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Build V2O5 Bilayer with LatticeMixer
In this video, we use LatticeMixer to build a V2O5 bilayer system.
V2O5 2D crystal: file download www.materialscloud.org/discover/mc2d/details/V2O5
Переглядів: 1 058

Відео

New Feature LatticeMixer - Orthorhombic Lattice Support
Переглядів 9442 роки тому
In this video, we look at how we can use LatticeMixer to make heterostructures for systems with orthorhombic lattices. The system we use is 2D KCl. Link to 2D KCl structure: www.materialscloud.org/discover/mc2d/details/KCl
[No Mic] Bi2Se3 Monolayer and Bilayer in VESTA
Переглядів 3,7 тис.2 роки тому
In this video, we use VESTA to make a monolayer and bilayer of Bi2Se3, a popular topological insulator. Comparing our structures with Figure 1 in the paper, PHYSICAL REVIEW B 88, 045312 (2013), it appears that we make the (111) surface in this video. Please note I may be mistaken, as I just checked by visual comparison. Link to materials cloud 2d crystal structure database for Bi2Se3: www.mater...
[No Mic] NanoCrystal / Graphene Heterostructure in VESTA
Переглядів 1,1 тис.2 роки тому
In this video, we use VESTA to build a heterostructure between graphene and a Au nanocrystal. Below are the links to the videos that show how to make the graphene and Au nanocrystal systems. Au nanocrystal: ua-cam.com/video/qvL2fHIe3lM/v-deo.html Graphene: ua-cam.com/video/vAc_vlSfQT0/v-deo.html
[No Mic] CdI2 / Graphene Heterojunctions with LatticeMixer
Переглядів 7492 роки тому
In this video, we use LatticeMixer to build a series of CdI2 / Graphene heterojunctions. Note: This video has no mic. CdI2: www.materialscloud.org/discover/mc2d/details/CdI2 Graphene: ua-cam.com/video/vAc_vlSfQT0/v-deo.html
Build Arsenene Moire Pattern Heterostructure with LatticeMixer!
Переглядів 9472 роки тому
In this video, we go to the Materials Cloud two-dimensional crystals database www.materialscloud.org/discover/mc2d/details/As and get the crystal structure of 2D As. We use this structure to make a Moire pattern in Lattice Mixer ATTENTION There seems to be an error with the CIF download option in materials cloud 2D data, which resulted in us obtaining the "flat" (non-buckled) structure. If you ...
Hartree Fock Program in Python Part 6b - SCF Cycle Part 2
Переглядів 2,2 тис.2 роки тому
In this video, we finish the SCF cycle and compute a bond dissociation curve for H2 This code is not intended to be an example of good programming - it is a naive approach for writing a Hartree Fock program in Python. I also think its possible that this code contains mistake - that's why I need YOU. Please check it out on github, and let me know. github.com/nickelandcopper/HartreeFockPythonProgram
Hartree Fock Program in Python Part 6a - SCF Cycle Part 1
Переглядів 1,8 тис.2 роки тому
In this video, we begin to add the SCF cycle. We prepare various H2 molecules with various bond distances and set up the function to compute the SCF energy. This code is not intended to be an example of good programming - it is a naive approach for writing a Hartree Fock program in Python github.com/nickelandcopper/HartreeFockPythonProgram
Build Pt (111) 8 Layer Slab Model (using primitive cell) in VESTA
Переглядів 4,2 тис.2 роки тому
In this video, we use VESTA to build a 8 Layer Pt (111) slab model.
Build Many Layer Graphene - MoSe2 - hBN heterojunction with LatticeMixer and VESTA
Переглядів 2,9 тис.2 роки тому
In this video, we use LatticeMixer and VESTA to build a tri-layer Graphene - MoSe2 - hBN heterojunction. Each of these systems have a hexagonal lattice and the contact face between them is the 001 face. www.latticemixer.com
Build Interface: cubic CsPbBr3 (001) / cubic Au (001) with LatticeMixer and VESTA
Переглядів 1,9 тис.2 роки тому
In this video, we use LatticeMixer and VESTA to build and analyze an interface between cubic CsPbBr3 (001) and cubic Au (001). Please note that the perovskite crystal surface here may is not stoichiometrically balanced nor charge neutral (assuming native oxidation numbers). One likely needs to add atoms/molecules to passivate dangling bonds on the surface of the perovskite crystal and bring cha...
Make Moire Pattern Models with LatticeMixer
Переглядів 2 тис.2 роки тому
In this video, I show how to use LatticeMixer to build Moire patterned heterostructures. i also show how LatticeMixer can be used to make other hexagonal/hexagonal and cubic/cubic interfaces. www.latticemixer.com
Build MAPbI3 (110) / Graphene Heterojunction in VESTA
Переглядів 3,2 тис.2 роки тому
In this video, we make the (110) surface slab of MAPbI3 and then interface it with graphene to make a heterojunction that I found in this paper (below): pubs.acs.org/doi/10.1021/acs.jpcc.8b03230 There are 3 main concepts covered in this video: 1. slab cutting of MAPbI3. This is nontrivial becuase we have to be careful about some iodine atoms in the vacuum axis dimension 2. Orthogonalize the hex...
Build g-c3N4 / CdS (110) interface in VESTA
Переглядів 4,3 тис.2 роки тому
In this video, we build an interface between g-c3N4 and the (110) surface of CdS. I do an adaptation of what is found at this reference: pubs.acs.org/doi/abs/10.1021/acs.jpcc.5b09092 Want to learn how to make 2D material heterostructures? Join the course to learn in full detail how to make 2D material heterostructure using VESTA early join new Slack community. Below is a link to the course for ...
Build Perovskite Slab Model in VESTA (two termination options)
Переглядів 4,4 тис.2 роки тому
In this video, we build the two types of PbTiO3 slab models from the following academic paper: www.sciencedirect.com/science/article/abs/pii/S0039602804000421 Want to learn how to make 2D material heterostructures? Join the course to learn in full detail how to make 2D material heterostructure using VESTA early join new Slack community. Below is a link to the course for the full description: Ud...
Hartree Fock Program in Python Part 5 - Nuclear Nuclear Repulsion Energy
Переглядів 1,4 тис.2 роки тому
Hartree Fock Program in Python Part 5 - Nuclear Nuclear Repulsion Energy
CoP 111 Slab Model in VESTA (very tricky)
Переглядів 3,3 тис.2 роки тому
CoP 111 Slab Model in VESTA (very tricky)
Build Slab Model in VESTA - CoP 001 Surface
Переглядів 4,4 тис.2 роки тому
Build Slab Model in VESTA - CoP 001 Surface
Surface Rotation in VESTA - Au (111) to Au(-110)
Переглядів 3,8 тис.2 роки тому
Surface Rotation in VESTA - Au (111) to Au(-110)
Build VSe2 Monolayer in VESTA (homo-bilayer included!)
Переглядів 3,6 тис.2 роки тому
Build VSe2 Monolayer in VESTA (homo-bilayer included!)
Announcement: Special Course on Using VESTA to Make on 2D Material Heterostructure Models
Переглядів 3 тис.2 роки тому
Announcement: Special Course on Using VESTA to Make on 2D Material Heterostructure Models
SiO2 (111) Slab Model (can be tricky) in VESTA
Переглядів 4 тис.2 роки тому
SiO2 (111) Slab Model (can be tricky) in VESTA
Build 5 layer Copper slab in VESTA (111 surface)
Переглядів 8 тис.2 роки тому
Build 5 layer Copper slab in VESTA (111 surface)
Build FePS3 Monolayer in VESTA (monoclinic cell)
Переглядів 2,6 тис.2 роки тому
Build FePS3 Monolayer in VESTA (monoclinic cell)
Build Stacking Fault in Vesta - Part 1
Переглядів 2,3 тис.2 роки тому
Build Stacking Fault in Vesta - Part 1
Hydrogen Passivation of Surface in Vesta (easy method)
Переглядів 3,2 тис.2 роки тому
Hydrogen Passivation of Surface in Vesta (easy method)
Slab Model CdSe 4layers in VESTA
Переглядів 2 тис.2 роки тому
Slab Model CdSe 4layers in VESTA
Cut Gold Nanocrystal In VESTA (new method)
Переглядів 2,2 тис.2 роки тому
Cut Gold Nanocrystal In VESTA (new method)
Hartree-Fock Program in Python - part 4 (finally)
Переглядів 2 тис.2 роки тому
Hartree-Fock Program in Python - part 4 (finally)
Hartree-Fock Program in Python - Part 3
Переглядів 3,3 тис.4 роки тому
Hartree-Fock Program in Python - Part 3

КОМЕНТАРІ

  • @sevenup8048
    @sevenup8048 День тому

    many thanks

  • @alhassanshuaibu5734
    @alhassanshuaibu5734 4 дні тому

    please can you make a monolayer VSi2N4

  • @ghandricheahcene9645
    @ghandricheahcene9645 8 днів тому

    Many thanks for this interesting video!

  • @aligulaj
    @aligulaj 13 днів тому

    This is awesome 👍🏾👍🏾👍🏾👍🏾

  • @aligulaj
    @aligulaj 14 днів тому

    Hi...this is great stuff. I am starting out with my phd work and this has been very handy. Your work has given me quiet some information to guide me in my research work on surface passivization pf perovskites. As i have gone through some of your work I have a few questions, I noticed a pattern one can use to prepare structures ready for first principles analysis, though I haven't really grasped it well. A suggestion video would be a walk-through on preparing structures for analysis for first principle analysis. Thank you and love your videos

  • @rahulsharma-sg7qu
    @rahulsharma-sg7qu 15 днів тому

    Hey, good presentation, may you suggest me how to make tilt Coincidence site lattice grain boundary for monoclinic structure using VESTA?

  • @saharbayat-u6j
    @saharbayat-u6j 16 днів тому

    Thanks for this great tutorial! Can you please also show how to make different layers of MAPI3 slabs?

  • @gulayalgul5208
    @gulayalgul5208 17 днів тому

    How can I obtain silicene monolayer, which is the 2D structure of Silicon, in Vesta. Thank you...

  • @payelsarkar7542
    @payelsarkar7542 18 днів тому

    @nickelandcopper5636 Sir, I managed to build a slab model of 2x2x2 supercell of ZnO but I am not sure if it's correct or not. Plz let me know how can I connect with u

  • @ahmedismail8867
    @ahmedismail8867 22 дні тому

    Hi sir, can you please share the cif file of g-C3N4. thank you

  • @SUM-1008
    @SUM-1008 29 днів тому

    Sir great efforts, Sir how I can make Fe Mono-layer? kindly guide me from very start, as I'm beginner

  • @johannaw.6735
    @johannaw.6735 Місяць тому

    Hey, thank you so much! I have one additional question - why is it advantageous to move the slab to the center of the cell?

  • @user-cd9ts1te3q
    @user-cd9ts1te3q Місяць тому

    Thank you sir, make pls Graphene monolayer on (111) surface of perovskite

  • @LongBui-sz4tw
    @LongBui-sz4tw Місяць тому

    ​ @nickelandcopper5636 ​Thanks for your video. also please make tutorial on "how to change space group". I do not know how to find a rotation matrix

  • @susheel9490
    @susheel9490 Місяць тому

    make some vedios how we can make functionalized QD

  • @arslanelahi6767
    @arslanelahi6767 Місяць тому

    Thank you so much! i need your help want to make a heterostructure of two different crystal like orthorhombic and cubic for siesta how i can do ?

  • @lachitsaikia5980
    @lachitsaikia5980 Місяць тому

    Very helpful. Could you prepare a video demonstrating modelling of core-shell nanoparticle?

  • @souravguha1238
    @souravguha1238 Місяць тому

    I am trying to build a Cu-MoTe2 system, with Cu as the elctrodes. Can you show how to proceed with this?

  • @johannaw.6735
    @johannaw.6735 2 місяці тому

    Thank you so much for your video! Do you know why choosing a rectangular base for the supercell instead of the one you showed here adds additional strain to the cell?

  • @RameshKumar-hv4gv
    @RameshKumar-hv4gv 2 місяці тому

    @nickelandcopper5636 It's a great and informative video. What about the next steps. Like introducing another species of atoms in this structure. please share that information.

  • @IrinaSamsonov
    @IrinaSamsonov 2 місяці тому

    Thank you for making these videos! I had a question about the angular momentum terms: for Carbon, for example. If using the STO-3G basis set, the p orbitals have the normalization constant A * x^la * y^lb * z^lc where the last part is the spherical part, and la+lb+lc = L (angular momentum quantum number). for the 2p orbital, la+lb+lc = 1 (-1, 0, and 1). So, would it be correct to assume the terms are the respective spherical harmonics? Also, would they be multiplied instead of added?

    • @IrinaSamsonov
      @IrinaSamsonov 2 місяці тому

      A correction to the question: the xyz part is included in the overlap matrix, so the normalization constant (in cartesian coordinates) is ((8alpha)^(la+lb+lc)*la!lb!lc! / (2la)!(2lb)!(2lc)!)^1/2 (found on wikipedia page for gaussian orbitals). for la=-1, would it be correct to use the absolute value when computing this part? Or I may be completely wrong about all of it, please let me know if you have time. Thank you!

  • @NguyenNguyen-cj7bg
    @NguyenNguyen-cj7bg 3 місяці тому

    Hello, Can you help me about this. I have generate the file for VASP. In the notepad there is about 21 atoms but when I opened it there are about 1000 atoms. Could you see the problem for me. Thank you

  • @chotaamiwaybaintai8232
    @chotaamiwaybaintai8232 4 місяці тому

    Sir can you please make a video on 3D hematite (Fe2O3) to 2D hematene

  • @shilpasingh9145
    @shilpasingh9145 4 місяці тому

    I am trying to make unit cell for Cu(110) surface. The final structure I am getting is BCC. Can you please verify if its correct? It will be really helpful..

  • @dwaipayanchakraborty8501
    @dwaipayanchakraborty8501 4 місяці тому

    Can you please explain how did you get the rotation matrix?

    • @HuggumsMcgehee
      @HuggumsMcgehee 2 місяці тому

      I don't know if this will completely help you, but the thumbnail of this video clinched it for me: ua-cam.com/video/4Y1_y9DI_Hw/v-deo.html I was trying to do what he's (EDIT: by "he" I mean the person in the current video) doing, but with the (104) plane. The normal vector to this plane lies on the xz-plane, so luckily, I only had to think about rotating about the y-axis to <001>. Any rotation in three dimensions can be seen as a sum of three rotations about each of the three axes. If you can figure out those angles, then it's simple. My rotation worked, by the way. When I click "a" to make the a vector point out of the screen, the (104) plane is now perpendicular to the c-axis. I'm having an entirely different problem where the software is adding tons of extra atoms. I don't know why.

  • @NguyenNguyen-cj7bg
    @NguyenNguyen-cj7bg 4 місяці тому

    I have build sucessfully strcuture like you but when I export data in .vasp it not the same like I designed. Can you help me about this. Thank you very much.

  • @haripokhrel3701
    @haripokhrel3701 4 місяці тому

    Can you please do it for Al2O3 from the beginning with the cif input file. I am getting a problem with it.

  • @woojinpark4204
    @woojinpark4204 4 місяці тому

    Thank you so much for your wonderful tutorial!! It helped a lot. Just one comment, in the scf cycle function, where it reads molecular terms "S, T, Vne, G" should be "S, T, Vne, Vee" I look forward to have amazing new videos soon :)

  • @snigdhachaudhuri7466
    @snigdhachaudhuri7466 4 місяці тому

    Can you tell me how to add metal to the surface of this??

  • @snigdhachaudhuri7466
    @snigdhachaudhuri7466 4 місяці тому

    Hi, Can you please tell me where I can get a CIF file for MWCNT?

  • @josedanielgutierrezlondono1274
    @josedanielgutierrezlondono1274 5 місяців тому

    Excellent, thank you!!

  • @llKingGamesll
    @llKingGamesll 5 місяців тому

    How I do with vesta and vasp? Just like you doing?

  • @llKingGamesll
    @llKingGamesll 5 місяців тому

    nice

  • @sigma914
    @sigma914 5 місяців тому

    How do you determine the rotation angle?

  • @hellmrf
    @hellmrf 5 місяців тому

    I've been searching around for this type of material for so long and see you published this video 3 years ago... Fantatisc material!

  • @riddhimansahoo2650
    @riddhimansahoo2650 6 місяців тому

    how do I form transformation matrix for any plane?

    • @HuggumsMcgehee
      @HuggumsMcgehee 2 місяці тому

      Posted this on another comment: I don't know if this will completely help you, but the thumbnail of this video clinched it for me: ua-cam.com/video/4Y1_y9DI_Hw/v-deo.html I was trying to do what he's (EDIT: by "he" I mean the person in the current video) doing, but with the (104) plane. The normal vector to this plane lies on the xz-plane, so luckily, I only had to think about rotating about the y-axis to <001>. Any rotation in three dimensions can be seen as a sum of three rotations about each of the three axes. If you can figure out those angles, then it's simple. My rotation worked, by the way. When I click "a" to make the a vector point out of the screen, the (104) plane is now perpendicular to the c-axis. I'm having an entirely different problem where the software is adding tons of extra atoms. I don't know why.

  • @user-sn3nd2ok8l
    @user-sn3nd2ok8l 6 місяців тому

    your videos are like an oasis to me. So helpful. Greatly appreciate for everything. Going through every on of your videos and just few are left! Hope you keep uploading your great lectures..

  • @raziqnawaz7263
    @raziqnawaz7263 7 місяців тому

    Please make a video on how to make 221 and 331 supercells of orthorhombic system

  • @shivampandey-yg4bc
    @shivampandey-yg4bc 7 місяців тому

    Can we make heterostructure, using one high density crystalline phase and amorphous phase.

  • @hafeezurrehman4311
    @hafeezurrehman4311 7 місяців тому

    i want to investigate the charge tranfer between metal and.polymer. what type of structure is helpful and how to make it

  • @sciencecraze
    @sciencecraze 7 місяців тому

    Sir, is this the ''surface adhesion'' species on a crystal? species or compounds that stick to the surface by adhesion?

  • @AkkuSalunke
    @AkkuSalunke 8 місяців тому

    Thank you for the excellent lecture. I have created one Quantum dot with the help of Vesta but when I open its (.xyz) file in IQmol, it does not show bonds between atoms. what could be the problem?

  • @user-us3ll3xk3n
    @user-us3ll3xk3n 8 місяців тому

    There is no twist angle in this moire pattern? only the strain in the upper-layer is generating lattice mismatch and we are getting the moire pattern am I correct please answer.....

  • @rageshnath
    @rageshnath 8 місяців тому

    Thank you very much for your great video, I have been trying to add hydrogen on the g C3N4 structure along with removing a particular on the ring. but after saving the files, the remove bond reappears. how do solve this? and how to reduce the N-H bond length in that ? i substituted H at the carbon position, but the bonds are not forming. any suggestion sir ?

  • @lucasaraujo3014
    @lucasaraujo3014 8 місяців тому

    Great work! I have a question. How can this be a Hartree-fock calculation if the wave function is not a Slater determinant? Where does spin enter?

  • @manar3284
    @manar3284 8 місяців тому

    Hello can you make video to help me for built bilayar of CrX3 monoclinic space c/2m. And each layer contain 4 atoms of cr .

  • @labmdt2338
    @labmdt2338 9 місяців тому

    Hello, I'm glad to see this video. Thx for making this I got many help from this. But I have some question about the rotation matrix setup. In your another video, Cu(111) slab, the rotation matrix was set as like this 0.5 0.5 1 0.5 -0.5 1 -1 0 1 but, you set different matrix for Pt(111) even they both are the same FCC structure. I wonder what made this differences and how should I choose the right matrix? Again thank you for your helping, and have a nice day :)

  • @xyz_file
    @xyz_file 9 місяців тому

    How to calculate the interlayer distance? If I make 6 A0 then I can't measure how to get 6 A0 separation in heterostructures.

  • @user-kt5bn9gn6z
    @user-kt5bn9gn6z 9 місяців тому

    For lead halide perovskite how to make crystal structure

  • @farhattasnim-ft1ii
    @farhattasnim-ft1ii 9 місяців тому

    I need Bi2Se3 (111) plane. Do I need to delete periodic atoms?