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Lecture 9: Application examples
Ninth lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N.
This presentation goes through some examples of running applications at HPC2N: Matlab, CryoSPARC, R.
Instructor and presenter: Pedro Ojeda-May, HPC2N, Umeå University, Umeå, Sweden.
Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n
Slides/presentations: hpc2n.github.io/intro-course/
GitHub repo (for exercises etc.): github.com/hpc2n/intro-course
Переглядів: 25

Відео

Lecture 8: Simple examples6:11Lecture 8: Simple examples
Lecture 8: Simple examples
Переглядів 72 години тому
Eight lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation is just an introduction to the batch exercises. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentations: hpc2n.github.io/intro-course/ GitHub repo (for exercises etc.): ...
Lecture 7: the Batch System25:19Lecture 7: the Batch System
Lecture 7: the Batch System
Переглядів 122 години тому
Seventh lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation looks at the batch system SLURM, and how to use it on HPC2N's supercomputer Kebnekaise. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentations: hpc2n.github.io/intro-...
Lecture 6: Compiling and linking19:22Lecture 6: Compiling and linking
Lecture 6: Compiling and linking
Переглядів 22 години тому
Sixth lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation looked at how to compile and link on HPC2N's supercomputer Kebnekaise. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentations: hpc2n.github.io/intro-course/ GitHub repo...
Lecture 5: the Modules System15:16Lecture 5: the Modules System
Lecture 5: the Modules System
Переглядів 72 години тому
Fifth lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation is about the module system and how to use it to access the installed software on HPC2N's supercomputer Kebnekaise. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentation...
Lecture 4: the Filesystem6:48Lecture 4: the Filesystem
Lecture 4: the Filesystem
Переглядів 32 години тому
Fourth lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation is about the filesystem on Kebnekaise. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentations: hpc2n.github.io/intro-course/ GitHub repo (for exercises etc.): github.c...
Lecture 3: Logging in17:32Lecture 3: Logging in
Lecture 3: Logging in
Переглядів 152 години тому
Third lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation looked at how to login to HPC2N's supercomputer Kebnekaise, using a regular SSH client and ThinLinc. There is also a brief discussion about editors (command line and GUI). Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se...
Lecture 1: Introduction to Kebnekaise, HPC2N, and HPC19:14Lecture 1: Introduction to Kebnekaise, HPC2N, and HPC
Lecture 1: Introduction to Kebnekaise, HPC2N, and HPC
Переглядів 132 години тому
First lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation was an introduction to HPC2N (High Performance Computing Centre North), our supercomputer Kebnekaise, and HPC. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentations: h...
Lecture 2: Projects and Accounts (SUPR)4:31Lecture 2: Projects and Accounts (SUPR)
Lecture 2: Projects and Accounts (SUPR)
Переглядів 92 години тому
Second lecture of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation looked at how to create project proposals in SUPR and how to get an account at HPC2N. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentations: hpc2n.github.io/intro-cou...
Lecture 0: Introduction12:33Lecture 0: Introduction
Lecture 0: Introduction
Переглядів 192 години тому
Initial lectures of the "Introduction to Kebnekaise" course which was given on 2024-09-16 by HPC2N. This presentation was an introduction to the course, and a look at the schedule and topics. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-hpc2n Slides/presentations: hpc2n.github.io/intro-course/ GitHu...
Lecture 6: Hints and tricks6:11Lecture 6: Hints and tricks
Lecture 6: Hints and tricks
Переглядів 94 години тому
Sixth lecture of the "Introduction to Linux" course which was given on 2024-09-16 by HPC2N under NAISS. This presentation has a small number of hints and tricks for using Linux more efficiently. Also has a summary for the course. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-linux Slides/presentation...
Lecture 5: Datahandling20:08Lecture 5: Datahandling
Lecture 5: Datahandling
Переглядів 84 години тому
Fifth lecture of the "Introduction to Linux" course which was given on 2024-09-16 by HPC2N under NAISS. This presentation was about datahandling on Linux. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-linux Slides/presentations: hpc2n.github.io/intro-linux/ GitHub repo (for exercises etc.): github.co...
Lecture 4: Editors on Linux6:30Lecture 4: Editors on Linux
Lecture 4: Editors on Linux
Переглядів 874 години тому
Fourth lecture of the "Introduction to Linux" course which was given on 2024-09-16 by HPC2N under NAISS. This presentation was about editors on Linux, both for the command line and for GUI. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-linux Slides/presentations: hpc2n.github.io/intro-linux/ GitHub r...
Lecture 3: The Linux Filesystem48:57Lecture 3: The Linux Filesystem
Lecture 3: The Linux Filesystem
Переглядів 404 години тому
Third lecture of the "Introduction to Linux" course which was given on 2024-09-16 by HPC2N under NAISS. This presentation was about the Linux filesystem. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-linux Slides/presentations: hpc2n.github.io/intro-linux/ GitHub repo (for exercises etc.): github.com...
Lecture 2: The Command Line (CLI)10:38Lecture 2: The Command Line (CLI)
Lecture 2: The Command Line (CLI)
Переглядів 204 години тому
Second lecture of the "Introduction to Linux" course which was given on 2024-09-16 by HPC2N under NAISS. This presentation is about the command line (CLI) in Linux. Instructor and presenter: Birgitte Brydsö, HPC2N, Umeå University, Umeå, Sweden. Course page: www.hpc2n.umu.se/events/courses/2024/fall/intro-linux Slides/presentations: hpc2n.github.io/intro-linux/ GitHub repo (for exercises etc.):...
Lecture 1: Introduction15:48Lecture 1: Introduction
Lecture 1: Introduction
Переглядів 1564 години тому
Lecture 1: Introduction
Lecture 7: Python and ML27:47Lecture 7: Python and ML
Lecture 7: Python and ML
Переглядів 414 місяці тому
Lecture 7: Python and ML
Lecture 5: Python in Parallel1:10:18Lecture 5: Python in Parallel
Lecture 5: Python in Parallel
Переглядів 1594 місяці тому
Lecture 5: Python in Parallel
Lecture 6: Python with GPUs14:27Lecture 6: Python with GPUs
Lecture 6: Python with GPUs
Переглядів 804 місяці тому
Lecture 6: Python with GPUs
Lecture 4: Running Python as an interactive job22:42Lecture 4: Running Python as an interactive job
Lecture 4: Running Python as an interactive job
Переглядів 244 місяці тому
Lecture 4: Running Python as an interactive job
Lecture 3: Running Python from a batch job25:19Lecture 3: Running Python from a batch job
Lecture 3: Running Python from a batch job
Переглядів 234 місяці тому
Lecture 3: Running Python from a batch job
Lecture 2: Install packages40:20Lecture 2: Install packages
Lecture 2: Install packages
Переглядів 244 місяці тому
Lecture 2: Install packages
Lecture 0: Introduction40:40Lecture 0: Introduction
Lecture 0: Introduction
Переглядів 594 місяці тому
Lecture 0: Introduction
Lecture 1: Loading and running Python26:23Lecture 1: Loading and running Python
Lecture 1: Loading and running Python
Переглядів 544 місяці тому
Lecture 1: Loading and running Python
Lecture 7b: Using Rstudio - Parallel session (UPPMAX)24:59Lecture 7b: Using Rstudio - Parallel session (UPPMAX)
Lecture 7b: Using Rstudio - Parallel session (UPPMAX)
Переглядів 196 місяців тому
Lecture 7b: Using Rstudio - Parallel session (UPPMAX)
Lecture 7a: Using Rstudio - Parallel session (HPC2N)14:49Lecture 7a: Using Rstudio - Parallel session (HPC2N)
Lecture 7a: Using Rstudio - Parallel session (HPC2N)
Переглядів 226 місяців тому
Lecture 7a: Using Rstudio - Parallel session (HPC2N)
Lecture 5: R and parallel jobs31:55Lecture 5: R and parallel jobs
Lecture 5: R and parallel jobs
Переглядів 256 місяців тому
Lecture 5: R and parallel jobs
Lecture 6: ML with R18:42Lecture 6: ML with R
Lecture 6: ML with R
Переглядів 86 місяців тому
Lecture 6: ML with R
Lecture 4: Working with R through the batch system24:57Lecture 4: Working with R through the batch system
Lecture 4: Working with R through the batch system
Переглядів 146 місяців тому
Lecture 4: Working with R through the batch system
Lecture 3: Virtual/isolated environments with R15:17Lecture 3: Virtual/isolated environments with R
Lecture 3: Virtual/isolated environments with R
Переглядів 126 місяців тому
Lecture 3: Virtual/isolated environments with R

КОМЕНТАРІ

  • @higiniofuentes2551
    @higiniofuentes2551 2 місяці тому

    Thank you for this very complete video!

  • @xinboli8151
    @xinboli8151 6 місяців тому

    These videos and the notes are tremendously helpful for who tries to learn about task-based parallel computing. Thank you so much! Love from Canada

  • @manashsarma4019
    @manashsarma4019 Рік тому

    Is the Gaussian16 oniom method suitable for QM/MM calculation?

  • @everythingfunctional
    @everythingfunctional Рік тому

    To answer the questions about mismatches between Fortran and C kinds, Fortran DOES NOT do automatic casts. It will see that you are passing values/variables that are not of the same kind as the function/subroutine declaration and refuse to compile it. You somehow managed not to actually try an example with a mismatch.

  • @everythingfunctional
    @everythingfunctional Рік тому

    Derived types absolutely can have allocatable components. Don't use pointers if you don't have to! If you want users to be able to access the components, just leave them public.

  • @mixx54
    @mixx54 Рік тому

    Everyone that reads this I hope you have a wonderful day!

  • @HPC2N
    @HPC2N 3 роки тому

    The sound disappears for about 1 minute around 42 minutes in. Sorry about that!