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All of Us Researcher Workbench
United States
Приєднався 12 бер 2020
Welcome to the All of Us Researcher Workbench channel, your one-stop destination for educational videos on how to work with the All of Us dataset.
From building cohorts and datasets to analyzing data in the cloud-based environment, our tutorial videos will support you during your All of Us research journey.
Whether you’re a seasoned researcher or just starting out, join the thousands of researchers leveraging the All of Us data and tools to drive their work.
From building cohorts and datasets to analyzing data in the cloud-based environment, our tutorial videos will support you during your All of Us research journey.
Whether you’re a seasoned researcher or just starting out, join the thousands of researchers leveraging the All of Us data and tools to drive their work.
Resource Highlight: an R Package | Office Hours 11.8.24
Welcome to another session of our Office Hours!
These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench.
In this video, Rob Cavanaugh, Ph.D., CCC-SLP and Louisa Smith, Ph.D., from Northeastern University give a presentation titled, "allofus: an R package to facilitate use of the All of Us Researcher Workbench."
Using the All of Us Research Program data for complex research questions requires a relatively high level of technical expertise. Recently, Drs. Cavanaugh and Smith published an R package, allofus, aimed at increasing research and training capacity and reducing barriers to entry for the All of Us community through an R package.
In this presentation, they describe functionality that addresses common challenges they encountered while working with All of Us Research Program data, demonstrate this functionality with an example of creating a cohort of All of Us participants, and discuss directions for future growth and community engagement.
If you have any questions, reach out to our support team at support@researchallofus.org
#AllofUsResearch #ResearcherWorkbench #HealthResearch #RPackage #MedicalResearch #DataScience #BiomedicalResearch #ResearchCommunity
recorded November 8, 2024
These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench.
In this video, Rob Cavanaugh, Ph.D., CCC-SLP and Louisa Smith, Ph.D., from Northeastern University give a presentation titled, "allofus: an R package to facilitate use of the All of Us Researcher Workbench."
Using the All of Us Research Program data for complex research questions requires a relatively high level of technical expertise. Recently, Drs. Cavanaugh and Smith published an R package, allofus, aimed at increasing research and training capacity and reducing barriers to entry for the All of Us community through an R package.
In this presentation, they describe functionality that addresses common challenges they encountered while working with All of Us Research Program data, demonstrate this functionality with an example of creating a cohort of All of Us participants, and discuss directions for future growth and community engagement.
If you have any questions, reach out to our support team at support@researchallofus.org
#AllofUsResearch #ResearcherWorkbench #HealthResearch #RPackage #MedicalResearch #DataScience #BiomedicalResearch #ResearchCommunity
recorded November 8, 2024
Переглядів: 71
Відео
Shared Workspace Storage for RStudio and SAS Studio | Office Hours 10.25.24
Переглядів 10428 днів тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, Moira Dillon from the Data and Research Center will provide an overview of the release of Google Cloud Storage FUSE (gcsfuse) in the All of Us Researcher Workbench. When using RStudio and SAS Studio,...
Customizing Jupyter Notebook Environments | Step-by-Step Tutorial
Переглядів 93Місяць тому
In this step-by-step tutorial, we'll take you through the simple steps for setting up a Jupyter Notebook environment on the All of Us Researcher Workbench. In this video, we'll cover everything you need to know, including: - Differences between General Analysis and Hail Genomics Analysis environment - How to modify the CPUs, RAM, auto-pause function, and more Quick links: 0:20 General Analysis ...
Paying for Your Research | Office Hours 9.27.24
Переглядів 110Місяць тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, Brandy Mapes, MLIS from the Data and Research Center provides a high-level overview of billing in the All of Us Researcher Workbench and will help answer questions you have related to using initial c...
Cohort Builder and Dataset Builder | Office Hours 9.13.24
Переглядів 2222 місяці тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, Sam Stewart, M.S. from the Data and Research Center gives an introduction to using the Cohort Builder and the Dataset Builder. On the Researcher Workbench, you can use the Cohort Builder to select pa...
Using All of Us Survey Data | Office Hours 8.23.24
Переглядів 1512 місяці тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, Andrew Guide, M.S. from Vanderbilt University Medical Center will provide a high-level overview of All of Us surveys to include structure and resources, general considerations when working with All o...
Researcher Presentation: Dr. Evan Brittain | Office Hours 8.9.24
Переглядів 4283 місяці тому
Welcome to another session of our Researcher Presentation series during Office Hours! These recordings highlight the research utilizing the All of Us dataset in the All of Us Researcher Workbench. In this video, our team is joined by Evan Brittain, M.D., M.Sc., a professor of medicine at the Vanderbilt University Medical Center. Dr. Brittain presents their research projects on integrating weara...
Using a Workspace Bucket with Jupyter Notebook | Step-by-Step Tutorial
Переглядів 1863 місяці тому
Save your files to a workspace bucket to reduce storage costs and to more easily collaborate with other Researcher Workbench users! 📦 In this step-by-step tutorial, we'll take you through a simple guide for using a workspace bucket with Jupyter Notebook on the Researcher Workbench. In this video, we'll cover everything you need to know, including: - Brief introduction to workspace buckets - Exp...
Structural Variant Data in the Researcher Workbench | Office Hours 7.26.24
Переглядів 1723 місяці тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, our team is joined by Emma Pierce-Hoffman, a computational associate at the Broad Institute, for an overview of the new structural variant (SV) data available in the Researcher Workbench. During this...
Deleting an Environment and Persistent Disk | Step-by-Step Tutorial
Переглядів 1044 місяці тому
Reduce costs by deleting your analysis environment and persistent disk when you’re done with your analysis! 🗑️ In this step-by-step tutorial, we'll take you through the simple steps for deleting your environment and persistent disk on the Workbench. In this video, we'll cover everything you need to know, including: - How to delete environment - How to delete your persistent disk Note: You can d...
Intro to Electronic Health Record (EHR) Data | Workshop
Переглядів 5604 місяці тому
Welcome to a deep dive into the electronic health record (EHR) data in the All of Us Researcher Workbench! In this video, Cathy Shyr, Ph.D., a research fellow in the Department of Biomedical Informatics at the Vanderbilt University Medical Center, provides an in-depth workshop on EHR data and the Observational Medical Outcomes Partnership (OMOP) Common Data Model. This workshop includes self-gu...
Supporting Student Projects in the All of Us Researcher Workbench | Office Hours 7.28.23
Переглядів 1124 місяці тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, Kathryn McDougal, Ph.D., a Clinical Associate Professor at Towson University, shares the ways she uses the All of Us Researcher Workbench for undergraduate student research. During this Office Hours,...
SAS Demonstration Projects | Office Hours 6.28.24
Переглядів 1205 місяців тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, our team is joined by two SAS Demonstration Project researchers, Bassent Abdelbary, Ph.D., MPH and Emily Goldmann, Ph.D., MPH, for an overview of their experience with SAS Studio in the Researcher Wo...
Sharing a Workspace on the All of Us Researcher Workbench | Step-by-Step Tutorial
Переглядів 2225 місяців тому
Unlock collaborative research in the All of Us Researcher Workbench! 🔍✨ In this step-by-step tutorial, we'll take you through the simple steps for sharing your workspace to collaborate with other registered Workbench users. In this video, we'll cover everything you need to know, including: - Instructions for sharing your workspace with others - Explanation of each workspace access type: reader,...
Policies for Sharing Research Results | Office Hours 3.8.24
Переглядів 675 місяців тому
Welcome to another session of our Office Hours! These recordings are your go-to place to discover new features and learn tips and tricks for using the All of Us Researcher Workbench. In this video, our team is joined by Nichole Holm, Ph.D. from the All of Us Research Program Policy Office. Nichole shares information on how to remain in compliance with All of Us policies when presenting or disse...
NIH Grant and Funding Opportunities | Office Hours 6.14.24
Переглядів 1925 місяців тому
NIH Grant and Funding Opportunities | Office Hours 6.14.24
Using SAS in the Workbench | Office Hours 5.24.24
Переглядів 2435 місяців тому
Using SAS in the Workbench | Office Hours 5.24.24
Researcher Presentation: Dr. Rahul Gupta | Office Hours 5.13.24
Переглядів 4,9 тис.6 місяців тому
Researcher Presentation: Dr. Rahul Gupta | Office Hours 5.13.24
Fitbit Device Data | Office Hours 4.26.24
Переглядів 7046 місяців тому
Fitbit Device Data | Office Hours 4.26.24
Variant Search Function within the Cohort Builder | Office Hours 4.12.24
Переглядів 5127 місяців тому
Variant Search Function within the Cohort Builder | Office Hours 4.12.24
Using Cromwell in the Workbench | Walkthrough
Переглядів 3507 місяців тому
Using Cromwell in the Workbench | Walkthrough
Using RStudio in the Researcher Workbench | Office Hours 3.22.24
Переглядів 6398 місяців тому
Using RStudio in the Researcher Workbench | Office Hours 3.22.24
Temporal Feature in the Cohort Builder | Office Hours 12.8.23
Переглядів 3669 місяців тому
Temporal Feature in the Cohort Builder | Office Hours 12.8.23
Understanding SQL, OMOP, & BigQuery | Office Hours 1.26.24
Переглядів 5019 місяців тому
Understanding SQL, OMOP, & BigQuery | Office Hours 1.26.24
Intro to Electronic Health Record (EHR) Data | Office Hours 1.12.24
Переглядів 1,1 тис.10 місяців тому
Intro to Electronic Health Record (EHR) Data | Office Hours 1.12.24
Cloud Environments and Storage Options | Office Hours 8.11.23
Переглядів 29711 місяців тому
Cloud Environments and Storage Options | Office Hours 8.11.23
Intro to Fitbit Data | Office Hours 10.27.23
Переглядів 398Рік тому
Intro to Fitbit Data | Office Hours 10.27.23
Using All of Us Data for Substance Use and Mental Health Research | Real World Applications
Переглядів 556Рік тому
Using All of Us Data for Substance Use and Mental Health Research | Real World Applications
Researcher Presentation: Dr. Eleni Friligkou | Office Hours 9.22.23
Переглядів 2,7 тис.Рік тому
Researcher Presentation: Dr. Eleni Friligkou | Office Hours 9.22.23