Cristal Medium Blue
Cristal Medium Blue
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Bacterial lineages leaving a trace in time
Bacterial lineages leaving a trace in time
Переглядів: 68

Відео

Dual holes
Переглядів 292 місяці тому
Dual holes
Lines with thickness
Переглядів 722 місяці тому
Lines with thickness
Layers going down
Переглядів 282 місяці тому
Layers going down
Layers
Переглядів 302 місяці тому
Layers
Some fibers
Переглядів 1392 місяці тому
Some fibers
Meeting point
Переглядів 672 місяці тому
Meeting point
Patern formation
Переглядів 593 місяці тому
Patern formation
Pattern formation by unbiased random walkers
Переглядів 3793 місяці тому
Thirty thousand unbiased random walkers forming clusters. Each random walker counts the total number of random walkers in its immediate neighborhood and then takes a random step in space. The maximum possible length of the step depends on the amount of neighbors within a radius. The random walkers take longer steps if they are either in a crowded region or in an uncrowded region. They take shor...
Clustering of unbiased random walkers
Переглядів 1,6 тис.3 місяці тому
Ten thousand unbiased random walkers forming clusters. Each random walker counts the total number of random walkers in its immediate neighborhood and then takes a random step in space. The maximum possible length of the step depends on the amount of neighbors within a radius. The random walkers take shorter steps if they are located in a crowded region, and they take longer steps if they are lo...
Random walkers are trapped on regions of space where maximum velocity is limited
Переглядів 3983 місяці тому
Unbiased random walkers form clusters in regions of space where the maximum possible step length is limited. The maximum possible step length a walker can take depends on the walker's location in space. The length of the step is a uniformly distributed random variable with mean zero: Step = D(R) * U(-1, 1) Where U(-1, 1) is the uniform distribution between -1 and 1. D(R) is the maximum possible...
Clustering of random walkers
Переглядів 1,4 тис.3 місяці тому
Ten thousand unbiased random walkers forming clusters. Each random walker counts the total number of random walkers in its immediate neighborhood and then takes a random step in space. The maximum possible length of the step depends on the amount of neighbors within a radius. The random walkers take shorter steps if they are located in a crowded region, and they take longer steps if they are lo...
Growing trees simulation (Diffusion-limited aggregation)
Переглядів 303 місяці тому
Growing trees simulation (Diffusion-limited aggregation)
Diffusion-limited aggregation
Переглядів 323 місяці тому
Diffusion-limited aggregation
DLA
Переглядів 163 місяці тому
DLA
clustering
Переглядів 264 місяці тому
clustering
Quadtree to efficiently check if two points are close to each other
Переглядів 245 місяців тому
Quadtree to efficiently check if two points are close to each other
Sequential pattern formation
Переглядів 386 місяців тому
Sequential pattern formation
Filaments grow from the tip
Переглядів 166 місяців тому
Filaments grow from the tip
Dynamic cytoplasm simulation
Переглядів 426 місяців тому
Dynamic cytoplasm simulation
Amoeba simulation
Переглядів 646 місяців тому
Amoeba simulation
Box2d.ts B. subtillis monolayer simulation
Переглядів 3710 місяців тому
Box2d.ts B. subtillis monolayer simulation
Bacteria Simulation of Nematic Alignment. Mosaic of micro-domains
Переглядів 5910 місяців тому
Bacteria Simulation of Nematic Alignment. Mosaic of micro-domains
What a 2-manifold looks like
Переглядів 4911 місяців тому
What a 2-manifold looks like
Time-lapse Bacterial Monolayer
Переглядів 6911 місяців тому
Time-lapse Bacterial Monolayer
Monolayer biofilm simulation
Переглядів 9011 місяців тому
Monolayer biofilm simulation
DIY PCR machine Arduino
Переглядів 54Рік тому
DIY PCR machine Arduino
Turing patterns + Agents
Переглядів 282Рік тому
Turing patterns Agents
Bacillus Growing Simulation
Переглядів 21Рік тому
Bacillus Growing Simulation

КОМЕНТАРІ

  • @CrapE_DM
    @CrapE_DM 24 дні тому

    I'm guessing that they have sort of collision system that causes them to get caught in "traffic jams

  • @Dan-vv2zt
    @Dan-vv2zt Місяць тому

    el logo himno de las bacterias mi canal favorito 😊

  • @leex5674
    @leex5674 Місяць тому

    reminds me of a windows 95 screensaver 💾

  • @Dan-vv2zt
    @Dan-vv2zt 3 місяці тому

    Amazing 😊

  • @lbgstzockt8493
    @lbgstzockt8493 3 місяці тому

    Kind of reminds me of pug wrinkles or that one wrinkly cake.

  • @pietrotettamanti3183
    @pietrotettamanti3183 3 місяці тому

    Does anyone know why this happens? And are there any theoretical calculations on the possible implications of this on local non-uniformities in thermodynamic quantities such as pressure in a gas. I think it may be very intresting!

    • @Nebula_ya
      @Nebula_ya 3 місяці тому

      Intuitively, it takes fewer steps to enter a cluster from outside (since they travel greater distances) and more steps to exit a cluster (due to reduced travel distance). So even if the chances of joining a cluster are not biased, once you eventually enter a cluster, it's harder to leave. Easy entry, hard escape.

  • @wolframalpha1
    @wolframalpha1 3 місяці тому

    if they take shorter steps when in crowded reigon rhen obvuoulsy they create clusters>

    • @CrapE_DM
      @CrapE_DM 24 дні тому

      I'm pretty sure it's a collision system that prevents them from going very far

  • @aleksanderorzechowski5580
    @aleksanderorzechowski5580 3 місяці тому

    Video has potential if you explain what's going on

    • @CrapE_DM
      @CrapE_DM 24 дні тому

      I think there's a collision system which causes "traffic jams"

  • @BrentVis
    @BrentVis 3 місяці тому

    This is really cool! Could you share the code for this program?

  • @rescyy2235
    @rescyy2235 3 місяці тому

    why is this happening?

  • @bobspianosbffl
    @bobspianosbffl 3 місяці тому

    So you call them unbiased walkers, despite the fact they are obviously biased by the number of neighbours.

    • @CristalMediumBlue
      @CristalMediumBlue 3 місяці тому

      They are unbiased in the sense that every direction the random walker can take has the same probability. In other words, the random walkers do not have any preferred direction to move. Which means, half of the time they will move left and half of the time they will move right. Half of the time they will move up, and half of the time they will move down. It seems to me that the clustering effect is not caused by a biased random walk, but rather, by a longer residence times in certain regions of space. In this simulation, it takes more time to explore certain regions of space because the maximum velocity that a particle can have depends on the number of neighboring particles. Edit: Does that make sense? (I am not an expert in the topic)

    • @bobspianosbffl
      @bobspianosbffl 3 місяці тому

      Well @CristalMediumBlue , you are an odd fellow, but I must say... you steam a good ham.

  • @ParticulateDynamicsLab-si9si
    @ParticulateDynamicsLab-si9si 3 місяці тому

    Interesting! To what extent is this effect dependent on Ito / Stratonovich / Isothermal convention for integrating the SDE, specifically the choice of whether D(R) is evaluated at the beginpoint or the endpoint of the random step?

    • @CristalMediumBlue
      @CristalMediumBlue 3 місяці тому

      In this simulation we evaluated D(R) at the beginning of each step. We haven't explored the effects of Stratonovich or Isothermal conventions in this particular study, but it's definitely an interesting question for further investigation. Thanks for this insight!

  • @williamhu9567
    @williamhu9567 3 місяці тому

    cool!

  • @metsanaata77
    @metsanaata77 3 місяці тому

    Is this used to model some specific natural phenomenon?

    • @CristalMediumBlue
      @CristalMediumBlue 3 місяці тому

      This particular simulation was made as an attempt to mimic protein clustering or bacteria agglomeration. But it is still unclear whether this is the right approach to describe these phenomena.

    • @jonathanf3604
      @jonathanf3604 3 місяці тому

      Almost looks like galaxy superclusters to me. The shorter steps are some similar to the gravity of the cluster pulling them in

    • @firstplacegaming4146
      @firstplacegaming4146 3 місяці тому

      @@CristalMediumBlue This simulation seems to be only 2D I would be careful generalizing from 2 to 3 dimensions as there are some neat theorems about ergodicity of random walkers in 2 vs 3+ dimensions. Notably 2D walkers are ergodic but 3D walkers are not.

  • @sheepcommander_
    @sheepcommander_ 3 місяці тому

    oh thats actually surprisingly neat?

  • @ParticulateDynamicsLab-si9si
    @ParticulateDynamicsLab-si9si 3 місяці тому

    Very nice movie! Are these absorbing boundary conditions?

    • @CristalMediumBlue
      @CristalMediumBlue 3 місяці тому

      Thanks! Yes, bacteria get deleted from the simulation once they cross the boundary. PS: The simulations posted on your channel are very encouraging to me.

  • @Dan-vv2zt
    @Dan-vv2zt 4 місяці тому

    Very beautiful 💌